Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcbP82349 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SgcbP82349 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SgcbP82349 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SgcbP82349 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.41■□□□□ 0.22
SgcbP82349 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.41■□□□□ 0.22
SgcbP82349 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcbP82349 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SgcbP82349 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Gm13148-201ENSMUST00000118892 745 ntBASIC16.4■□□□□ 0.22
SgcbP82349 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SgcbP82349 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SgcbP82349 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SgcbP82349 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcbP82349 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SgcbP82349 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.39■□□□□ 0.21
SgcbP82349 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SgcbP82349 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcbP82349 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.38■□□□□ 0.21
SgcbP82349 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgcbP82349 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SgcbP82349 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SgcbP82349 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SgcbP82349 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SgcbP82349 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SgcbP82349 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.37■□□□□ 0.21
SgcbP82349 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SgcbP82349 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SgcbP82349 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.36■□□□□ 0.21
SgcbP82349 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.36■□□□□ 0.21
SgcbP82349 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SgcbP82349 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SgcbP82349 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.35■□□□□ 0.21
SgcbP82349 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SgcbP82349 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
SgcbP82349 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms