Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ybx1P62960 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.88■□□□□ 0.61
Ybx1P62960 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ybx1P62960 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.88■□□□□ 0.61
Ybx1P62960 Mtag2-201ENSMUST00000058665 714 ntBASIC18.88■□□□□ 0.61
Ybx1P62960 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Ybx1P62960 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ybx1P62960 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ybx1P62960 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.87■□□□□ 0.61
Ybx1P62960 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.87■□□□□ 0.61
Ybx1P62960 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ybx1P62960 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ybx1P62960 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.87■□□□□ 0.61
Ybx1P62960 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ybx1P62960 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ybx1P62960 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ybx1P62960 Flg-201ENSMUST00000050758 1488 ntBASIC18.87■□□□□ 0.61
Ybx1P62960 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.87■□□□□ 0.61
Ybx1P62960 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ybx1P62960 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ybx1P62960 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ybx1P62960 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ybx1P62960 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.86■□□□□ 0.61
Ybx1P62960 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ybx1P62960 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.86■□□□□ 0.61
Ybx1P62960 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ybx1P62960 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ybx1P62960 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.85■□□□□ 0.61
Ybx1P62960 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.85■□□□□ 0.61
Ybx1P62960 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ybx1P62960 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.85■□□□□ 0.61
Ybx1P62960 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.85■□□□□ 0.61
Ybx1P62960 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.85■□□□□ 0.61
Ybx1P62960 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ybx1P62960 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ybx1P62960 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ybx1P62960 Mir5122-201ENSMUST00000175004 89 ntBASIC18.84■□□□□ 0.61
Ybx1P62960 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ybx1P62960 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ybx1P62960 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ybx1P62960 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ybx1P62960 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ybx1P62960 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ybx1P62960 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ybx1P62960 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ybx1P62960 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ybx1P62960 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ybx1P62960 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ybx1P62960 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.83■□□□□ 0.6
Ybx1P62960 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ybx1P62960 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ybx1P62960 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.82■□□□□ 0.6
Ybx1P62960 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.82■□□□□ 0.6
Ybx1P62960 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ybx1P62960 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ybx1P62960 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.82■□□□□ 0.6
Ybx1P62960 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ybx1P62960 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms