Protein–RNA interactions for Protein: P59438

Hps5, Hermansky-Pudlak syndrome 5 protein homolog, mousemouse

Predictions only

Length 1,126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps5P59438 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hps5P59438 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hps5P59438 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.61■□□□□ 0.89
Hps5P59438 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Hps5P59438 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.61■□□□□ 0.89
Hps5P59438 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hps5P59438 Gm7860-201ENSMUST00000121190 879 ntBASIC20.61■□□□□ 0.89
Hps5P59438 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.61■□□□□ 0.89
Hps5P59438 Gm10819-201ENSMUST00000099988 561 ntBASIC20.61■□□□□ 0.89
Hps5P59438 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hps5P59438 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.6■□□□□ 0.89
Hps5P59438 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Gm13534-201ENSMUST00000121169 513 ntBASIC20.6■□□□□ 0.89
Hps5P59438 Gm37055-201ENSMUST00000191866 133 ntBASIC20.6■□□□□ 0.89
Hps5P59438 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.6■□□□□ 0.89
Hps5P59438 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Hps5P59438 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hps5P59438 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps5P59438 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hps5P59438 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps5P59438 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps5P59438 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Hps5P59438 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hps5P59438 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.59■□□□□ 0.89
Hps5P59438 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps5P59438 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hps5P59438 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.59■□□□□ 0.89
Hps5P59438 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps5P59438 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.58■□□□□ 0.89
Hps5P59438 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps5P59438 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps5P59438 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps5P59438 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hps5P59438 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.58■□□□□ 0.89
Hps5P59438 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hps5P59438 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hps5P59438 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Hps5P59438 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Hps5P59438 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.58■□□□□ 0.88
Hps5P59438 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Hps5P59438 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hps5P59438 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hps5P59438 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hps5P59438 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.57■□□□□ 0.88
Hps5P59438 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Hps5P59438 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.57■□□□□ 0.88
Hps5P59438 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hps5P59438 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hps5P59438 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hps5P59438 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps5P59438 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hps5P59438 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.56■□□□□ 0.88
Hps5P59438 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps5P59438 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps5P59438 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hps5P59438 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hps5P59438 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Hps5P59438 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Hps5P59438 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Hps5P59438 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.55■□□□□ 0.88
Hps5P59438 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.55■□□□□ 0.88
Hps5P59438 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hps5P59438 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.55■□□□□ 0.88
Hps5P59438 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.55■□□□□ 0.88
Hps5P59438 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hps5P59438 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hps5P59438 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hps5P59438 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps5P59438 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hps5P59438 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps5P59438 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hps5P59438 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms