Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek1P51954 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nek1P51954 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.49■□□□□ 0.87
Nek1P51954 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.49■□□□□ 0.87
Nek1P51954 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.49■□□□□ 0.87
Nek1P51954 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.49■□□□□ 0.87
Nek1P51954 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek1P51954 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.48■□□□□ 0.87
Nek1P51954 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nek1P51954 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek1P51954 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
Nek1P51954 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Nek1P51954 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.47■□□□□ 0.87
Nek1P51954 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nek1P51954 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek1P51954 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek1P51954 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nek1P51954 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nek1P51954 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nek1P51954 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek1P51954 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.46■□□□□ 0.87
Nek1P51954 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nek1P51954 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek1P51954 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Nek1P51954 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.45■□□□□ 0.86
Nek1P51954 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.45■□□□□ 0.86
Nek1P51954 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.45■□□□□ 0.86
Nek1P51954 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nek1P51954 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.45■□□□□ 0.86
Nek1P51954 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Nek1P51954 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nek1P51954 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.44■□□□□ 0.86
Nek1P51954 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nek1P51954 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek1P51954 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.44■□□□□ 0.86
Nek1P51954 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.44■□□□□ 0.86
Nek1P51954 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek1P51954 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek1P51954 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nek1P51954 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek1P51954 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Nek1P51954 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.43■□□□□ 0.86
Nek1P51954 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
Nek1P51954 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek1P51954 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek1P51954 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek1P51954 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek1P51954 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.42■□□□□ 0.86
Nek1P51954 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.42■□□□□ 0.86
Nek1P51954 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.42■□□□□ 0.86
Nek1P51954 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nek1P51954 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nek1P51954 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nek1P51954 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms