Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx3P48381 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfx3P48381 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfx3P48381 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rfx3P48381 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rfx3P48381 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.61■□□□□ 0.25
Rfx3P48381 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.61■□□□□ 0.25
Rfx3P48381 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rfx3P48381 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.61■□□□□ 0.25
Rfx3P48381 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfx3P48381 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.6■□□□□ 0.25
Rfx3P48381 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.6■□□□□ 0.25
Rfx3P48381 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Rfx3P48381 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.6■□□□□ 0.25
Rfx3P48381 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfx3P48381 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx3P48381 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx3P48381 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rfx3P48381 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Rfx3P48381 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.59■□□□□ 0.25
Rfx3P48381 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.59■□□□□ 0.25
Rfx3P48381 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rfx3P48381 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rfx3P48381 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx3P48381 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx3P48381 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx3P48381 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx3P48381 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.58■□□□□ 0.24
Rfx3P48381 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx3P48381 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx3P48381 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx3P48381 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rfx3P48381 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Rfx3P48381 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rfx3P48381 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rfx3P48381 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rfx3P48381 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rfx3P48381 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rfx3P48381 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rfx3P48381 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.57■□□□□ 0.24
Rfx3P48381 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx3P48381 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx3P48381 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx3P48381 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx3P48381 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.56■□□□□ 0.24
Rfx3P48381 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.56■□□□□ 0.24
Rfx3P48381 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.56■□□□□ 0.24
Rfx3P48381 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms