Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdh4P39038 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdh4P39038 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cdh4P39038 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.57■□□□□ 0.4
Cdh4P39038 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdh4P39038 BC021767-201ENSMUST00000126387 1716 ntBASIC17.57■□□□□ 0.4
Cdh4P39038 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdh4P39038 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.57■□□□□ 0.4
Cdh4P39038 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdh4P39038 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cdh4P39038 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.56■□□□□ 0.4
Cdh4P39038 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdh4P39038 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdh4P39038 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.56■□□□□ 0.4
Cdh4P39038 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdh4P39038 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh4P39038 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cdh4P39038 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cdh4P39038 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdh4P39038 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdh4P39038 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.55■□□□□ 0.4
Cdh4P39038 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Gm5408-201ENSMUST00000197998 747 ntBASIC17.54■□□□□ 0.4
Cdh4P39038 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh4P39038 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cdh4P39038 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Cdh4P39038 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdh4P39038 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdh4P39038 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.53■□□□□ 0.4
Cdh4P39038 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdh4P39038 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdh4P39038 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.53■□□□□ 0.4
Cdh4P39038 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdh4P39038 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdh4P39038 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdh4P39038 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh4P39038 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh4P39038 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.52■□□□□ 0.4
Cdh4P39038 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh4P39038 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdh4P39038 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cdh4P39038 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh4P39038 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh4P39038 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdh4P39038 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cdh4P39038 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdh4P39038 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh4P39038 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh4P39038 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdh4P39038 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh4P39038 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdh4P39038 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh4P39038 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh4P39038 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdh4P39038 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms