Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.32■□□□□ 0.2
P20040 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P20040 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.32■□□□□ 0.2
P20040 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P20040 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P20040 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
P20040 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P20040 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
P20040 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.31■□□□□ 0.2
P20040 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
P20040 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.31■□□□□ 0.2
P20040 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.31■□□□□ 0.2
P20040 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P20040 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
P20040 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.3■□□□□ 0.2
P20040 Gm18671-201ENSMUST00000214826 683 ntBASIC16.3■□□□□ 0.2
P20040 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
P20040 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
P20040 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
P20040 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
P20040 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
P20040 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.29■□□□□ 0.2
P20040 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
P20040 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
P20040 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
P20040 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
P20040 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
P20040 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P20040 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.28■□□□□ 0.2
P20040 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.28■□□□□ 0.2
P20040 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P20040 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P20040 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.28■□□□□ 0.2
P20040 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.28■□□□□ 0.2
P20040 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.28■□□□□ 0.2
P20040 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
P20040 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
P20040 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
P20040 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.27■□□□□ 0.2
P20040 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
P20040 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.27■□□□□ 0.2
P20040 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms