Protein–RNA interactions for Protein: P09022

Hoxa1, Homeobox protein Hox-A1, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa1P09022 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Hoxa1P09022 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Hoxa1P09022 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hoxa1P09022 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa1P09022 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxa1P09022 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxa1P09022 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.99□□□□□ -0.01
Hoxa1P09022 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.99□□□□□ -0.01
Hoxa1P09022 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hoxa1P09022 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hoxa1P09022 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Hoxa1P09022 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxa1P09022 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.98□□□□□ -0.01
Hoxa1P09022 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.98□□□□□ -0.01
Hoxa1P09022 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hoxa1P09022 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Hoxa1P09022 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hoxa1P09022 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.97□□□□□ -0.01
Hoxa1P09022 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.97□□□□□ -0.01
Hoxa1P09022 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.97□□□□□ -0.01
Hoxa1P09022 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.97□□□□□ -0.01
Hoxa1P09022 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.97□□□□□ -0.01
Hoxa1P09022 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxa1P09022 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hoxa1P09022 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hoxa1P09022 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxa1P09022 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hoxa1P09022 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Hoxa1P09022 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Hoxa1P09022 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.96□□□□□ -0.01
Hoxa1P09022 Gm43060-201ENSMUST00000200621 289 ntBASIC14.96□□□□□ -0.01
Hoxa1P09022 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.96□□□□□ -0.01
Hoxa1P09022 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hoxa1P09022 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms