Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cd74P04441 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cd74P04441 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Cd74P04441 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cd74P04441 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cd74P04441 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.39■□□□□ 0.05
Cd74P04441 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cd74P04441 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.39■□□□□ 0.05
Cd74P04441 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.39■□□□□ 0.05
Cd74P04441 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.39■□□□□ 0.05
Cd74P04441 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.39■□□□□ 0.05
Cd74P04441 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cd74P04441 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cd74P04441 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cd74P04441 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.38■□□□□ 0.05
Cd74P04441 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.38■□□□□ 0.05
Cd74P04441 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cd74P04441 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.37■□□□□ 0.05
Cd74P04441 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cd74P04441 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.37■□□□□ 0.05
Cd74P04441 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cd74P04441 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.37■□□□□ 0.05
Cd74P04441 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cd74P04441 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.36■□□□□ 0.05
Cd74P04441 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cd74P04441 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cd74P04441 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cd74P04441 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cd74P04441 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cd74P04441 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Cd74P04441 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cd74P04441 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.35■□□□□ 0.05
Cd74P04441 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd74P04441 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.35■□□□□ 0.05
Cd74P04441 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms