Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
TcraP01849 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TcraP01849 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TcraP01849 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TcraP01849 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.44□□□□□ -0.26
TcraP01849 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TcraP01849 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TcraP01849 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TcraP01849 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TcraP01849 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TcraP01849 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TcraP01849 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TcraP01849 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TcraP01849 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TcraP01849 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
TcraP01849 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.42□□□□□ -0.26
TcraP01849 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TcraP01849 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TcraP01849 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
TcraP01849 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TcraP01849 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.41□□□□□ -0.26
TcraP01849 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.41□□□□□ -0.26
TcraP01849 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TcraP01849 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.41□□□□□ -0.26
TcraP01849 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TcraP01849 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TcraP01849 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.4□□□□□ -0.26
TcraP01849 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.4□□□□□ -0.26
TcraP01849 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TcraP01849 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.4□□□□□ -0.26
TcraP01849 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TcraP01849 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TcraP01849 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms