Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vti1aO89116 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.82■□□□□ 0.76
Vti1aO89116 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vti1aO89116 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Vti1aO89116 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vti1aO89116 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vti1aO89116 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vti1aO89116 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Vti1aO89116 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vti1aO89116 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vti1aO89116 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vti1aO89116 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vti1aO89116 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.8■□□□□ 0.76
Vti1aO89116 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.8■□□□□ 0.76
Vti1aO89116 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vti1aO89116 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.8■□□□□ 0.76
Vti1aO89116 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vti1aO89116 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vti1aO89116 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Vti1aO89116 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vti1aO89116 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.78■□□□□ 0.76
Vti1aO89116 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Vti1aO89116 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.78■□□□□ 0.76
Vti1aO89116 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Vti1aO89116 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Vti1aO89116 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vti1aO89116 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1aO89116 BC021767-201ENSMUST00000126387 1716 ntBASIC19.77■□□□□ 0.76
Vti1aO89116 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1aO89116 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1aO89116 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1aO89116 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1aO89116 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.77■□□□□ 0.76
Vti1aO89116 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vti1aO89116 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Vti1aO89116 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vti1aO89116 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.76■□□□□ 0.75
Vti1aO89116 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.76■□□□□ 0.75
Vti1aO89116 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vti1aO89116 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.76■□□□□ 0.75
Vti1aO89116 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vti1aO89116 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms