Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d1bO35324 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sh2d1bO35324 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.15■□□□□ 0.34
Sh2d1bO35324 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Sh2d1bO35324 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Sh2d1bO35324 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Sh2d1bO35324 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d1bO35324 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.14■□□□□ 0.33
Sh2d1bO35324 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d1bO35324 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
Sh2d1bO35324 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Mtag2-201ENSMUST00000058665 714 ntBASIC17.12■□□□□ 0.33
Sh2d1bO35324 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh2d1bO35324 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Mir6982-201ENSMUST00000184354 68 ntBASIC17.11■□□□□ 0.33
Sh2d1bO35324 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.11■□□□□ 0.33
Sh2d1bO35324 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh2d1bO35324 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.1■□□□□ 0.33
Sh2d1bO35324 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Gm18025-201ENSMUST00000221733 862 ntBASIC17.1■□□□□ 0.33
Sh2d1bO35324 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh2d1bO35324 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh2d1bO35324 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh2d1bO35324 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.09■□□□□ 0.33
Sh2d1bO35324 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d1bO35324 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d1bO35324 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.09■□□□□ 0.33
Sh2d1bO35324 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.09■□□□□ 0.33
Sh2d1bO35324 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d1bO35324 BC021767-201ENSMUST00000126387 1716 ntBASIC17.09■□□□□ 0.33
Sh2d1bO35324 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh2d1bO35324 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh2d1bO35324 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms