Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh16f1E9Q9P8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Gm7291-201ENSMUST00000199147 382 ntBASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh16f1E9Q9P8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rdh16f1E9Q9P8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh16f1E9Q9P8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Rdh16f1E9Q9P8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh16f1E9Q9P8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rdh16f1E9Q9P8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rdh16f1E9Q9P8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rdh16f1E9Q9P8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh16f1E9Q9P8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms