Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm10493-201ENSMUST00000097270 612 ntBASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.36□□□□□ -0.27
Trav9n-2A0A0G2JDP3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms