Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav4-3A0A0B4J1K1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav4-3A0A0B4J1K1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4-3A0A0B4J1K1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm40881-201ENSMUST00000223397 166 ntBASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4-3A0A0B4J1K1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.54□□□□□ -0.4
Trav4-3A0A0B4J1K1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms