Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.33□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.33□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trbv13-3A0A0B4J1H2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms