Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Trav3-4A0A075B654 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Scarna2-201ENSMUST00000157560 414 ntBASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav3-4A0A075B654 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-4A0A075B654 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-4A0A075B654 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-4A0A075B654 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-4A0A075B654 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Gm11687-201ENSMUST00000118911 886 ntBASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav3-4A0A075B654 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-4A0A075B654 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms