Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav16A0A075B653 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.21□□□□□ -0.13
Trav16A0A075B653 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.21□□□□□ -0.13
Trav16A0A075B653 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav16A0A075B653 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav16A0A075B653 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.21□□□□□ -0.14
Trav16A0A075B653 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav16A0A075B653 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav16A0A075B653 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.2□□□□□ -0.14
Trav16A0A075B653 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav16A0A075B653 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav16A0A075B653 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav16A0A075B653 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16A0A075B653 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.17□□□□□ -0.14
Trav16A0A075B653 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav16A0A075B653 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms