Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9n-4A0A075B631 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-4A0A075B631 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9n-4A0A075B631 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9n-4A0A075B631 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Gm43017-201ENSMUST00000198296 752 ntBASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Gm6139-201ENSMUST00000079261 882 ntBASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9n-4A0A075B631 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.56□□□□□ -0.4
Trav9n-4A0A075B631 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9n-4A0A075B631 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms