Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav16d-dv11A0A075B617 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm13238-201ENSMUST00000117655 780 ntBASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav16d-dv11A0A075B617 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav16d-dv11A0A075B617 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16d-dv11A0A075B617 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16d-dv11A0A075B617 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16d-dv11A0A075B617 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav16d-dv11A0A075B617 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav16d-dv11A0A075B617 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.52□□□□□ -0.24
Trav16d-dv11A0A075B617 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Mir6538-201ENSMUST00000183713 110 ntBASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav16d-dv11A0A075B617 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav16d-dv11A0A075B617 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav16d-dv11A0A075B617 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms