Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sec61a2Q9JLR1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sec61a2Q9JLR1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sec61a2Q9JLR1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sec61a2Q9JLR1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sec61a2Q9JLR1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
Sec61a2Q9JLR1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sec61a2Q9JLR1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec61a2Q9JLR1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sec61a2Q9JLR1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sec61a2Q9JLR1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sec61a2Q9JLR1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Sec61a2Q9JLR1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sec61a2Q9JLR1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec61a2Q9JLR1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sec61a2Q9JLR1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sec61a2Q9JLR1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sec61a2Q9JLR1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.99■■□□□ 1.11
Sec61a2Q9JLR1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sec61a2Q9JLR1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sec61a2Q9JLR1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sec61a2Q9JLR1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sec61a2Q9JLR1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sec61a2Q9JLR1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.94■■□□□ 1.1
Sec61a2Q9JLR1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a2Q9JLR1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sec61a2Q9JLR1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sec61a2Q9JLR1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.91■■□□□ 1.1
Sec61a2Q9JLR1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sec61a2Q9JLR1 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.9■■□□□ 1.1
Sec61a2Q9JLR1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec61a2Q9JLR1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec61a2Q9JLR1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Sec61a2Q9JLR1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sec61a2Q9JLR1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sec61a2Q9JLR1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sec61a2Q9JLR1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sec61a2Q9JLR1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec61a2Q9JLR1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec61a2Q9JLR1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sec61a2Q9JLR1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Sec61a2Q9JLR1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec61a2Q9JLR1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sec61a2Q9JLR1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Sec61a2Q9JLR1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sec61a2Q9JLR1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.86■■□□□ 1.09
Sec61a2Q9JLR1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Sec61a2Q9JLR1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec61a2Q9JLR1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sec61a2Q9JLR1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sec61a2Q9JLR1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sec61a2Q9JLR1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sec61a2Q9JLR1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sec61a2Q9JLR1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sec61a2Q9JLR1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sec61a2Q9JLR1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sec61a2Q9JLR1 Amer2-203ENSMUST00000225247 2662 ntBASIC21.82■■□□□ 1.08
Sec61a2Q9JLR1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
Sec61a2Q9JLR1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sec61a2Q9JLR1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sec61a2Q9JLR1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.8■■□□□ 1.08
Sec61a2Q9JLR1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sec61a2Q9JLR1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.8■■□□□ 1.08
Sec61a2Q9JLR1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sec61a2Q9JLR1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sec61a2Q9JLR1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sec61a2Q9JLR1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sec61a2Q9JLR1 Gm45855-201ENSMUST00000212546 880 ntBASIC21.79■■□□□ 1.08
Sec61a2Q9JLR1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Sec61a2Q9JLR1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sec61a2Q9JLR1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sec61a2Q9JLR1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.77■■□□□ 1.08
Sec61a2Q9JLR1 Gm9397-201ENSMUST00000200125 605 ntBASIC21.77■■□□□ 1.08
Sec61a2Q9JLR1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sec61a2Q9JLR1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sec61a2Q9JLR1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sec61a2Q9JLR1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sec61a2Q9JLR1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sec61a2Q9JLR1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.75■■□□□ 1.07
Sec61a2Q9JLR1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.75■■□□□ 1.07
Sec61a2Q9JLR1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.75■■□□□ 1.07
Sec61a2Q9JLR1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sec61a2Q9JLR1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Sec61a2Q9JLR1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sec61a2Q9JLR1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.72■■□□□ 1.07
Sec61a2Q9JLR1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sec61a2Q9JLR1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sec61a2Q9JLR1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.72■■□□□ 1.07
Sec61a2Q9JLR1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.71■■□□□ 1.07
Sec61a2Q9JLR1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sec61a2Q9JLR1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.7■■□□□ 1.06
Sec61a2Q9JLR1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec61a2Q9JLR1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sec61a2Q9JLR1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sec61a2Q9JLR1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sec61a2Q9JLR1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sec61a2Q9JLR1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sec61a2Q9JLR1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Sec61a2Q9JLR1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sec61a2Q9JLR1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms