Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf13bQ9ET35 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf13bQ9ET35 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf13bQ9ET35 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.54■□□□□ 0.72
Tnfrsf13bQ9ET35 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf13bQ9ET35 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf13bQ9ET35 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.53■□□□□ 0.72
Tnfrsf13bQ9ET35 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf13bQ9ET35 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Tnfrsf13bQ9ET35 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf13bQ9ET35 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf13bQ9ET35 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf13bQ9ET35 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf13bQ9ET35 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf13bQ9ET35 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Tnfrsf13bQ9ET35 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf13bQ9ET35 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Tnfrsf13bQ9ET35 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf13bQ9ET35 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf13bQ9ET35 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf13bQ9ET35 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf13bQ9ET35 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf13bQ9ET35 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf13bQ9ET35 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.48■□□□□ 0.71
Tnfrsf13bQ9ET35 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf13bQ9ET35 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf13bQ9ET35 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.48■□□□□ 0.71
Tnfrsf13bQ9ET35 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf13bQ9ET35 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf13bQ9ET35 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Tnfrsf13bQ9ET35 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf13bQ9ET35 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf13bQ9ET35 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf13bQ9ET35 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf13bQ9ET35 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf13bQ9ET35 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf13bQ9ET35 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tnfrsf13bQ9ET35 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tnfrsf13bQ9ET35 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf13bQ9ET35 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnfrsf13bQ9ET35 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf13bQ9ET35 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf13bQ9ET35 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnfrsf13bQ9ET35 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf13bQ9ET35 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnfrsf13bQ9ET35 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tnfrsf13bQ9ET35 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnfrsf13bQ9ET35 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnfrsf13bQ9ET35 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnfrsf13bQ9ET35 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tnfrsf13bQ9ET35 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tnfrsf13bQ9ET35 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf13bQ9ET35 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnfrsf13bQ9ET35 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf13bQ9ET35 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tnfrsf13bQ9ET35 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf13bQ9ET35 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf13bQ9ET35 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Tnfrsf13bQ9ET35 Peli2-204ENSMUST00000226513 1320 ntBASIC19.33■□□□□ 0.69
Tnfrsf13bQ9ET35 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf13bQ9ET35 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf13bQ9ET35 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf13bQ9ET35 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf13bQ9ET35 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf13bQ9ET35 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf13bQ9ET35 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf13bQ9ET35 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf13bQ9ET35 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf13bQ9ET35 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf13bQ9ET35 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf13bQ9ET35 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf13bQ9ET35 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf13bQ9ET35 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Tnfrsf13bQ9ET35 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf13bQ9ET35 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf13bQ9ET35 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf13bQ9ET35 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Tnfrsf13bQ9ET35 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.26■□□□□ 0.67
Tnfrsf13bQ9ET35 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Tnfrsf13bQ9ET35 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.25■□□□□ 0.67
Tnfrsf13bQ9ET35 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf13bQ9ET35 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf13bQ9ET35 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf13bQ9ET35 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf13bQ9ET35 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf13bQ9ET35 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf13bQ9ET35 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tnfrsf13bQ9ET35 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf13bQ9ET35 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tnfrsf13bQ9ET35 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf13bQ9ET35 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf13bQ9ET35 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf13bQ9ET35 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tnfrsf13bQ9ET35 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf13bQ9ET35 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf13bQ9ET35 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.19■□□□□ 0.66
Tnfrsf13bQ9ET35 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf13bQ9ET35 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tnfrsf13bQ9ET35 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfrsf13bQ9ET35 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 252 ms