Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.33■■□□□ 1.48
5530400C23RikQ9D3I0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
5530400C23RikQ9D3I0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
5530400C23RikQ9D3I0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
5530400C23RikQ9D3I0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
5530400C23RikQ9D3I0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
5530400C23RikQ9D3I0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
5530400C23RikQ9D3I0 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.3■■□□□ 1.48
5530400C23RikQ9D3I0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
5530400C23RikQ9D3I0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
5530400C23RikQ9D3I0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
5530400C23RikQ9D3I0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
5530400C23RikQ9D3I0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
5530400C23RikQ9D3I0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.27■■□□□ 1.48
5530400C23RikQ9D3I0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.25■■□□□ 1.47
5530400C23RikQ9D3I0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
5530400C23RikQ9D3I0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
5530400C23RikQ9D3I0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
5530400C23RikQ9D3I0 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.23■■□□□ 1.47
5530400C23RikQ9D3I0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
5530400C23RikQ9D3I0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
5530400C23RikQ9D3I0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
5530400C23RikQ9D3I0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
5530400C23RikQ9D3I0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
5530400C23RikQ9D3I0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.19■■□□□ 1.46
5530400C23RikQ9D3I0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.18■■□□□ 1.46
5530400C23RikQ9D3I0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.18■■□□□ 1.46
5530400C23RikQ9D3I0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
5530400C23RikQ9D3I0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
5530400C23RikQ9D3I0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
5530400C23RikQ9D3I0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
5530400C23RikQ9D3I0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.16■■□□□ 1.46
5530400C23RikQ9D3I0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
5530400C23RikQ9D3I0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
5530400C23RikQ9D3I0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
5530400C23RikQ9D3I0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
5530400C23RikQ9D3I0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.15■■□□□ 1.46
5530400C23RikQ9D3I0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
5530400C23RikQ9D3I0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
5530400C23RikQ9D3I0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
5530400C23RikQ9D3I0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
5530400C23RikQ9D3I0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
5530400C23RikQ9D3I0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
5530400C23RikQ9D3I0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
5530400C23RikQ9D3I0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
5530400C23RikQ9D3I0 Gm9397-201ENSMUST00000200125 605 ntBASIC24.11■■□□□ 1.45
5530400C23RikQ9D3I0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
5530400C23RikQ9D3I0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
5530400C23RikQ9D3I0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.09■■□□□ 1.45
5530400C23RikQ9D3I0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.09■■□□□ 1.45
5530400C23RikQ9D3I0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.08■■□□□ 1.45
5530400C23RikQ9D3I0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
5530400C23RikQ9D3I0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.08■■□□□ 1.45
5530400C23RikQ9D3I0 Gm45855-201ENSMUST00000212546 880 ntBASIC24.08■■□□□ 1.45
5530400C23RikQ9D3I0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
5530400C23RikQ9D3I0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
5530400C23RikQ9D3I0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
5530400C23RikQ9D3I0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.05■■□□□ 1.44
5530400C23RikQ9D3I0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
5530400C23RikQ9D3I0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
5530400C23RikQ9D3I0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
5530400C23RikQ9D3I0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
5530400C23RikQ9D3I0 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.03■■□□□ 1.44
5530400C23RikQ9D3I0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
5530400C23RikQ9D3I0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.02■■□□□ 1.44
5530400C23RikQ9D3I0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
5530400C23RikQ9D3I0 Amer2-203ENSMUST00000225247 2662 ntBASIC24.01■■□□□ 1.43
5530400C23RikQ9D3I0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
5530400C23RikQ9D3I0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
5530400C23RikQ9D3I0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
5530400C23RikQ9D3I0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
5530400C23RikQ9D3I0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
5530400C23RikQ9D3I0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
5530400C23RikQ9D3I0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
5530400C23RikQ9D3I0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
5530400C23RikQ9D3I0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
5530400C23RikQ9D3I0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
5530400C23RikQ9D3I0 Gm24970-201ENSMUST00000175582 82 ntBASIC23.96■■□□□ 1.43
5530400C23RikQ9D3I0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
5530400C23RikQ9D3I0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
5530400C23RikQ9D3I0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
5530400C23RikQ9D3I0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.95■■□□□ 1.42
5530400C23RikQ9D3I0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.95■■□□□ 1.42
5530400C23RikQ9D3I0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
5530400C23RikQ9D3I0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
5530400C23RikQ9D3I0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
5530400C23RikQ9D3I0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
5530400C23RikQ9D3I0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.93■■□□□ 1.42
5530400C23RikQ9D3I0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
5530400C23RikQ9D3I0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
5530400C23RikQ9D3I0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
5530400C23RikQ9D3I0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
5530400C23RikQ9D3I0 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.91■■□□□ 1.42
5530400C23RikQ9D3I0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
5530400C23RikQ9D3I0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
5530400C23RikQ9D3I0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.9■■□□□ 1.42
5530400C23RikQ9D3I0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
5530400C23RikQ9D3I0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.89■■□□□ 1.41
5530400C23RikQ9D3I0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
5530400C23RikQ9D3I0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms