Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hcfc1r1Q9CYQ5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hcfc1r1Q9CYQ5 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.48■■□□□ 1.03
Hcfc1r1Q9CYQ5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.48■■□□□ 1.03
Hcfc1r1Q9CYQ5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hcfc1r1Q9CYQ5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hcfc1r1Q9CYQ5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hcfc1r1Q9CYQ5 Gm25262-201ENSMUST00000174934 133 ntBASIC21.45■■□□□ 1.02
Hcfc1r1Q9CYQ5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hcfc1r1Q9CYQ5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hcfc1r1Q9CYQ5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hcfc1r1Q9CYQ5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hcfc1r1Q9CYQ5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Hcfc1r1Q9CYQ5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hcfc1r1Q9CYQ5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hcfc1r1Q9CYQ5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Hcfc1r1Q9CYQ5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hcfc1r1Q9CYQ5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hcfc1r1Q9CYQ5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hcfc1r1Q9CYQ5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.37■■□□□ 1.01
Hcfc1r1Q9CYQ5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hcfc1r1Q9CYQ5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hcfc1r1Q9CYQ5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Hcfc1r1Q9CYQ5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcfc1r1Q9CYQ5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hcfc1r1Q9CYQ5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.35■■□□□ 1.01
Hcfc1r1Q9CYQ5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hcfc1r1Q9CYQ5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.34■■□□□ 1.01
Hcfc1r1Q9CYQ5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hcfc1r1Q9CYQ5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hcfc1r1Q9CYQ5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hcfc1r1Q9CYQ5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hcfc1r1Q9CYQ5 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.33■■□□□ 1.01
Hcfc1r1Q9CYQ5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Hcfc1r1Q9CYQ5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Hcfc1r1Q9CYQ5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Hcfc1r1Q9CYQ5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Hcfc1r1Q9CYQ5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hcfc1r1Q9CYQ5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Hcfc1r1Q9CYQ5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hcfc1r1Q9CYQ5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hcfc1r1Q9CYQ5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hcfc1r1Q9CYQ5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Hcfc1r1Q9CYQ5 Gm27322-201ENSMUST00000184007 104 ntBASIC21.3■■□□□ 1
Hcfc1r1Q9CYQ5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hcfc1r1Q9CYQ5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcfc1r1Q9CYQ5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hcfc1r1Q9CYQ5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.29■■□□□ 1
Hcfc1r1Q9CYQ5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hcfc1r1Q9CYQ5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
Hcfc1r1Q9CYQ5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Hcfc1r1Q9CYQ5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hcfc1r1Q9CYQ5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcfc1r1Q9CYQ5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcfc1r1Q9CYQ5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcfc1r1Q9CYQ5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hcfc1r1Q9CYQ5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hcfc1r1Q9CYQ5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcfc1r1Q9CYQ5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hcfc1r1Q9CYQ5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.23■□□□□ 0.99
Hcfc1r1Q9CYQ5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hcfc1r1Q9CYQ5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcfc1r1Q9CYQ5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Hcfc1r1Q9CYQ5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcfc1r1Q9CYQ5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcfc1r1Q9CYQ5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Hcfc1r1Q9CYQ5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcfc1r1Q9CYQ5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hcfc1r1Q9CYQ5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.19■□□□□ 0.98
Hcfc1r1Q9CYQ5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hcfc1r1Q9CYQ5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcfc1r1Q9CYQ5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.18■□□□□ 0.98
Hcfc1r1Q9CYQ5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hcfc1r1Q9CYQ5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hcfc1r1Q9CYQ5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hcfc1r1Q9CYQ5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hcfc1r1Q9CYQ5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.17■□□□□ 0.98
Hcfc1r1Q9CYQ5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hcfc1r1Q9CYQ5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcfc1r1Q9CYQ5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hcfc1r1Q9CYQ5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hcfc1r1Q9CYQ5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcfc1r1Q9CYQ5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hcfc1r1Q9CYQ5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hcfc1r1Q9CYQ5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Hcfc1r1Q9CYQ5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hcfc1r1Q9CYQ5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcfc1r1Q9CYQ5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Hcfc1r1Q9CYQ5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcfc1r1Q9CYQ5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcfc1r1Q9CYQ5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hcfc1r1Q9CYQ5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hcfc1r1Q9CYQ5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcfc1r1Q9CYQ5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hcfc1r1Q9CYQ5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hcfc1r1Q9CYQ5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hcfc1r1Q9CYQ5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hcfc1r1Q9CYQ5 Peli2-204ENSMUST00000226513 1320 ntBASIC21.06■□□□□ 0.96
Hcfc1r1Q9CYQ5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hcfc1r1Q9CYQ5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms