Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Rnf135Q9CWS1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rnf135Q9CWS1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Rnf135Q9CWS1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rnf135Q9CWS1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rnf135Q9CWS1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rnf135Q9CWS1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rnf135Q9CWS1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Rnf135Q9CWS1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.75■■□□□ 1.71
Rnf135Q9CWS1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Rnf135Q9CWS1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Rnf135Q9CWS1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf135Q9CWS1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf135Q9CWS1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf135Q9CWS1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
Rnf135Q9CWS1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf135Q9CWS1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Rnf135Q9CWS1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.7■■□□□ 1.7
Rnf135Q9CWS1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf135Q9CWS1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf135Q9CWS1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf135Q9CWS1 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.69■■□□□ 1.7
Rnf135Q9CWS1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf135Q9CWS1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf135Q9CWS1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf135Q9CWS1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.66■■□□□ 1.7
Rnf135Q9CWS1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.65■■□□□ 1.7
Rnf135Q9CWS1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf135Q9CWS1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf135Q9CWS1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
Rnf135Q9CWS1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf135Q9CWS1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.64■■□□□ 1.7
Rnf135Q9CWS1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf135Q9CWS1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf135Q9CWS1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf135Q9CWS1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.62■■□□□ 1.69
Rnf135Q9CWS1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf135Q9CWS1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
Rnf135Q9CWS1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf135Q9CWS1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf135Q9CWS1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.59■■□□□ 1.69
Rnf135Q9CWS1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.56■■□□□ 1.68
Rnf135Q9CWS1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf135Q9CWS1 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.55■■□□□ 1.68
Rnf135Q9CWS1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Rnf135Q9CWS1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.55■■□□□ 1.68
Rnf135Q9CWS1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.54■■□□□ 1.68
Rnf135Q9CWS1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf135Q9CWS1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Rnf135Q9CWS1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf135Q9CWS1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Rnf135Q9CWS1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf135Q9CWS1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf135Q9CWS1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Rnf135Q9CWS1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.5■■□□□ 1.67
Rnf135Q9CWS1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.49■■□□□ 1.67
Rnf135Q9CWS1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Rnf135Q9CWS1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf135Q9CWS1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf135Q9CWS1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf135Q9CWS1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf135Q9CWS1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf135Q9CWS1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
Rnf135Q9CWS1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf135Q9CWS1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf135Q9CWS1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf135Q9CWS1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Rnf135Q9CWS1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Rnf135Q9CWS1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf135Q9CWS1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.44■■□□□ 1.66
Rnf135Q9CWS1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf135Q9CWS1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf135Q9CWS1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf135Q9CWS1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf135Q9CWS1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf135Q9CWS1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Rnf135Q9CWS1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf135Q9CWS1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.41■■□□□ 1.66
Rnf135Q9CWS1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf135Q9CWS1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.39■■□□□ 1.66
Rnf135Q9CWS1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf135Q9CWS1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf135Q9CWS1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Rnf135Q9CWS1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Rnf135Q9CWS1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf135Q9CWS1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf135Q9CWS1 Gm45855-201ENSMUST00000212546 880 ntBASIC25.37■■□□□ 1.65
Rnf135Q9CWS1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Rnf135Q9CWS1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf135Q9CWS1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf135Q9CWS1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Rnf135Q9CWS1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf135Q9CWS1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf135Q9CWS1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf135Q9CWS1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Rnf135Q9CWS1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf135Q9CWS1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf135Q9CWS1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf135Q9CWS1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf135Q9CWS1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 188.2 ms