Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm45855-201ENSMUST00000212546 880 ntBASIC25.94■■□□□ 1.74
Pcdha3Q91Y16 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdha3Q91Y16 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdha3Q91Y16 Gm9397-201ENSMUST00000200125 605 ntBASIC25.93■■□□□ 1.74
Pcdha3Q91Y16 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdha3Q91Y16 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.92■■□□□ 1.74
Pcdha3Q91Y16 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdha3Q91Y16 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
Pcdha3Q91Y16 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdha3Q91Y16 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.91■■□□□ 1.74
Pcdha3Q91Y16 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdha3Q91Y16 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdha3Q91Y16 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdha3Q91Y16 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdha3Q91Y16 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdha3Q91Y16 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdha3Q91Y16 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.89■■□□□ 1.74
Pcdha3Q91Y16 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdha3Q91Y16 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
Pcdha3Q91Y16 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdha3Q91Y16 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.86■■□□□ 1.73
Pcdha3Q91Y16 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdha3Q91Y16 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdha3Q91Y16 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdha3Q91Y16 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.83■■□□□ 1.73
Pcdha3Q91Y16 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdha3Q91Y16 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdha3Q91Y16 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.8■■□□□ 1.72
Pcdha3Q91Y16 Amer2-203ENSMUST00000225247 2662 ntBASIC25.8■■□□□ 1.72
Pcdha3Q91Y16 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdha3Q91Y16 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
Pcdha3Q91Y16 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdha3Q91Y16 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.79■■□□□ 1.72
Pcdha3Q91Y16 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha3Q91Y16 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha3Q91Y16 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha3Q91Y16 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdha3Q91Y16 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
Pcdha3Q91Y16 Gm24970-201ENSMUST00000175582 82 ntBASIC25.76■■□□□ 1.71
Pcdha3Q91Y16 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.76■■□□□ 1.71
Pcdha3Q91Y16 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdha3Q91Y16 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdha3Q91Y16 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.75■■□□□ 1.71
Pcdha3Q91Y16 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.75■■□□□ 1.71
Pcdha3Q91Y16 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdha3Q91Y16 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdha3Q91Y16 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdha3Q91Y16 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdha3Q91Y16 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdha3Q91Y16 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.72■■□□□ 1.71
Pcdha3Q91Y16 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Pcdha3Q91Y16 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdha3Q91Y16 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdha3Q91Y16 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdha3Q91Y16 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdha3Q91Y16 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdha3Q91Y16 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Pcdha3Q91Y16 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdha3Q91Y16 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdha3Q91Y16 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.69■■□□□ 1.7
Pcdha3Q91Y16 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdha3Q91Y16 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdha3Q91Y16 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha3Q91Y16 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Pcdha3Q91Y16 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha3Q91Y16 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.67■■□□□ 1.7
Pcdha3Q91Y16 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdha3Q91Y16 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.67■■□□□ 1.7
Pcdha3Q91Y16 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdha3Q91Y16 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Pcdha3Q91Y16 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdha3Q91Y16 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
Pcdha3Q91Y16 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Pcdha3Q91Y16 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.65■■□□□ 1.7
Pcdha3Q91Y16 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdha3Q91Y16 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
Pcdha3Q91Y16 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha3Q91Y16 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.63■■□□□ 1.69
Pcdha3Q91Y16 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdha3Q91Y16 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Pcdha3Q91Y16 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdha3Q91Y16 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdha3Q91Y16 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.61■■□□□ 1.69
Pcdha3Q91Y16 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdha3Q91Y16 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdha3Q91Y16 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdha3Q91Y16 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha3Q91Y16 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdha3Q91Y16 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.59■■□□□ 1.69
Pcdha3Q91Y16 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdha3Q91Y16 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdha3Q91Y16 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdha3Q91Y16 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdha3Q91Y16 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdha3Q91Y16 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha3Q91Y16 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha3Q91Y16 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdha3Q91Y16 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha3Q91Y16 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdha3Q91Y16 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms