Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb4Q91XZ6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.49■■□□□ 1.51
Pcdhb4Q91XZ6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Pcdhb4Q91XZ6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb4Q91XZ6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb4Q91XZ6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb4Q91XZ6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb4Q91XZ6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb4Q91XZ6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb4Q91XZ6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb4Q91XZ6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb4Q91XZ6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.43■■□□□ 1.5
Pcdhb4Q91XZ6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb4Q91XZ6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb4Q91XZ6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb4Q91XZ6 Gm16148-201ENSMUST00000119653 893 ntBASIC24.41■■□□□ 1.5
Pcdhb4Q91XZ6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb4Q91XZ6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb4Q91XZ6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Pcdhb4Q91XZ6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb4Q91XZ6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhb4Q91XZ6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb4Q91XZ6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb4Q91XZ6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb4Q91XZ6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhb4Q91XZ6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhb4Q91XZ6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb4Q91XZ6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Pcdhb4Q91XZ6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Pcdhb4Q91XZ6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Pcdhb4Q91XZ6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.33■■□□□ 1.48
Pcdhb4Q91XZ6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb4Q91XZ6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb4Q91XZ6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb4Q91XZ6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Pcdhb4Q91XZ6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdhb4Q91XZ6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb4Q91XZ6 Amer2-203ENSMUST00000225247 2662 ntBASIC24.28■■□□□ 1.48
Pcdhb4Q91XZ6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.28■■□□□ 1.48
Pcdhb4Q91XZ6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.27■■□□□ 1.48
Pcdhb4Q91XZ6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb4Q91XZ6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb4Q91XZ6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Pcdhb4Q91XZ6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.26■■□□□ 1.47
Pcdhb4Q91XZ6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb4Q91XZ6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb4Q91XZ6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb4Q91XZ6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb4Q91XZ6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb4Q91XZ6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb4Q91XZ6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb4Q91XZ6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.24■■□□□ 1.47
Pcdhb4Q91XZ6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Pcdhb4Q91XZ6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb4Q91XZ6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb4Q91XZ6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb4Q91XZ6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb4Q91XZ6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb4Q91XZ6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb4Q91XZ6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb4Q91XZ6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Pcdhb4Q91XZ6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb4Q91XZ6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.17■■□□□ 1.46
Pcdhb4Q91XZ6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb4Q91XZ6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.16■■□□□ 1.46
Pcdhb4Q91XZ6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb4Q91XZ6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.16■■□□□ 1.46
Pcdhb4Q91XZ6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb4Q91XZ6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb4Q91XZ6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb4Q91XZ6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb4Q91XZ6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb4Q91XZ6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdhb4Q91XZ6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Pcdhb4Q91XZ6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Pcdhb4Q91XZ6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Pcdhb4Q91XZ6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb4Q91XZ6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb4Q91XZ6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb4Q91XZ6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb4Q91XZ6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.13■■□□□ 1.45
Pcdhb4Q91XZ6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
Pcdhb4Q91XZ6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb4Q91XZ6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb4Q91XZ6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb4Q91XZ6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb4Q91XZ6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb4Q91XZ6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb4Q91XZ6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb4Q91XZ6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Pcdhb4Q91XZ6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb4Q91XZ6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Pcdhb4Q91XZ6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb4Q91XZ6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb4Q91XZ6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb4Q91XZ6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb4Q91XZ6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb4Q91XZ6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Pcdhb4Q91XZ6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb4Q91XZ6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 1423.9 ms