Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
Pcdhb8Q91XZ2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb8Q91XZ2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb8Q91XZ2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.11■■□□□ 1.45
Pcdhb8Q91XZ2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Pcdhb8Q91XZ2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb8Q91XZ2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdhb8Q91XZ2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
Pcdhb8Q91XZ2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhb8Q91XZ2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb8Q91XZ2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdhb8Q91XZ2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Pcdhb8Q91XZ2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb8Q91XZ2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb8Q91XZ2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb8Q91XZ2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb8Q91XZ2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb8Q91XZ2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb8Q91XZ2 Amer2-203ENSMUST00000225247 2662 ntBASIC24.05■■□□□ 1.44
Pcdhb8Q91XZ2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Pcdhb8Q91XZ2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb8Q91XZ2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb8Q91XZ2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb8Q91XZ2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Pcdhb8Q91XZ2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb8Q91XZ2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb8Q91XZ2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24■■□□□ 1.43
Pcdhb8Q91XZ2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24■■□□□ 1.43
Pcdhb8Q91XZ2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhb8Q91XZ2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhb8Q91XZ2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhb8Q91XZ2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhb8Q91XZ2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.98■■□□□ 1.43
Pcdhb8Q91XZ2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhb8Q91XZ2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhb8Q91XZ2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb8Q91XZ2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb8Q91XZ2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Pcdhb8Q91XZ2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb8Q91XZ2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb8Q91XZ2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb8Q91XZ2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb8Q91XZ2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.94■■□□□ 1.42
Pcdhb8Q91XZ2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhb8Q91XZ2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb8Q91XZ2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
Pcdhb8Q91XZ2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb8Q91XZ2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb8Q91XZ2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb8Q91XZ2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.92■■□□□ 1.42
Pcdhb8Q91XZ2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb8Q91XZ2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb8Q91XZ2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb8Q91XZ2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhb8Q91XZ2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb8Q91XZ2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb8Q91XZ2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhb8Q91XZ2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb8Q91XZ2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhb8Q91XZ2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdhb8Q91XZ2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb8Q91XZ2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhb8Q91XZ2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Pcdhb8Q91XZ2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb8Q91XZ2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb8Q91XZ2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb8Q91XZ2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.81■■□□□ 1.4
Pcdhb8Q91XZ2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb8Q91XZ2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb8Q91XZ2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb8Q91XZ2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb8Q91XZ2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.79■■□□□ 1.4
Pcdhb8Q91XZ2 Zfp131-205ENSMUST00000223812 663 ntBASIC23.79■■□□□ 1.4
Pcdhb8Q91XZ2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb8Q91XZ2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb8Q91XZ2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb8Q91XZ2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb8Q91XZ2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb8Q91XZ2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdhb8Q91XZ2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms