Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb17Q91VD8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.85■■□□□ 1.73
Pcdhb17Q91VD8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhb17Q91VD8 Gm24970-201ENSMUST00000175582 82 ntBASIC25.83■■□□□ 1.73
Pcdhb17Q91VD8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.83■■□□□ 1.73
Pcdhb17Q91VD8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb17Q91VD8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb17Q91VD8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.82■■□□□ 1.72
Pcdhb17Q91VD8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb17Q91VD8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb17Q91VD8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb17Q91VD8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb17Q91VD8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhb17Q91VD8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Pcdhb17Q91VD8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb17Q91VD8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb17Q91VD8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb17Q91VD8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb17Q91VD8 Zxda-201ENSMUST00000117281 2621 ntBASIC25.77■■□□□ 1.72
Pcdhb17Q91VD8 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.77■■□□□ 1.72
Pcdhb17Q91VD8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhb17Q91VD8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.74■■□□□ 1.71
Pcdhb17Q91VD8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb17Q91VD8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb17Q91VD8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Pcdhb17Q91VD8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb17Q91VD8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Pcdhb17Q91VD8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb17Q91VD8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.73■■□□□ 1.71
Pcdhb17Q91VD8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb17Q91VD8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Pcdhb17Q91VD8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb17Q91VD8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Pcdhb17Q91VD8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.69■■□□□ 1.7
Pcdhb17Q91VD8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb17Q91VD8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.69■■□□□ 1.7
Pcdhb17Q91VD8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb17Q91VD8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
Pcdhb17Q91VD8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb17Q91VD8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.66■■□□□ 1.7
Pcdhb17Q91VD8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.66■■□□□ 1.7
Pcdhb17Q91VD8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
Pcdhb17Q91VD8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb17Q91VD8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb17Q91VD8 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.64■■□□□ 1.7
Pcdhb17Q91VD8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb17Q91VD8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
Pcdhb17Q91VD8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb17Q91VD8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb17Q91VD8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb17Q91VD8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb17Q91VD8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.62■■□□□ 1.69
Pcdhb17Q91VD8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdhb17Q91VD8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.61■■□□□ 1.69
Pcdhb17Q91VD8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.6■■□□□ 1.69
Pcdhb17Q91VD8 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.59■■□□□ 1.69
Pcdhb17Q91VD8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb17Q91VD8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.58■■□□□ 1.69
Pcdhb17Q91VD8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Pcdhb17Q91VD8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Pcdhb17Q91VD8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb17Q91VD8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb17Q91VD8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb17Q91VD8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.55■■□□□ 1.68
Pcdhb17Q91VD8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb17Q91VD8 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.53■■□□□ 1.68
Pcdhb17Q91VD8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb17Q91VD8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb17Q91VD8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb17Q91VD8 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.52■■□□□ 1.68
Pcdhb17Q91VD8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.52■■□□□ 1.68
Pcdhb17Q91VD8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb17Q91VD8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb17Q91VD8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb17Q91VD8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb17Q91VD8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb17Q91VD8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb17Q91VD8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.48■■□□□ 1.67
Pcdhb17Q91VD8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb17Q91VD8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb17Q91VD8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb17Q91VD8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.45■■□□□ 1.67
Pcdhb17Q91VD8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.44■■□□□ 1.66
Pcdhb17Q91VD8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb17Q91VD8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Pcdhb17Q91VD8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb17Q91VD8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb17Q91VD8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb17Q91VD8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.43■■□□□ 1.66
Pcdhb17Q91VD8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb17Q91VD8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb17Q91VD8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb17Q91VD8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb17Q91VD8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb17Q91VD8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb17Q91VD8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.4■■□□□ 1.66
Pcdhb17Q91VD8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb17Q91VD8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb17Q91VD8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb17Q91VD8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms