Protein–RNA interactions for Protein: Q8VEM9

Klhdc3, Kelch domain-containing protein 3, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhdc3Q8VEM9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21,47■■□□□ 1,03
Klhdc3Q8VEM9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21,47■■□□□ 1,03
Klhdc3Q8VEM9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21,47■■□□□ 1,03
Klhdc3Q8VEM9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Klhdc3Q8VEM9 Zxda-201ENSMUST00000117281 2621 ntBASIC21,45■■□□□ 1,02
Klhdc3Q8VEM9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Klhdc3Q8VEM9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21,44■■□□□ 1,02
Klhdc3Q8VEM9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21,44■■□□□ 1,02
Klhdc3Q8VEM9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21,44■■□□□ 1,02
Klhdc3Q8VEM9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21,43■■□□□ 1,02
Klhdc3Q8VEM9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Klhdc3Q8VEM9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21,43■■□□□ 1,02
Klhdc3Q8VEM9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Klhdc3Q8VEM9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21,43■■□□□ 1,02
Klhdc3Q8VEM9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21,43■■□□□ 1,02
Klhdc3Q8VEM9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21,42■■□□□ 1,02
Klhdc3Q8VEM9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21,41■■□□□ 1,02
Klhdc3Q8VEM9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21,4■■□□□ 1,02
Klhdc3Q8VEM9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21,39■■□□□ 1,02
Klhdc3Q8VEM9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Klhdc3Q8VEM9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21,38■■□□□ 1,01
Klhdc3Q8VEM9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21,38■■□□□ 1,01
Klhdc3Q8VEM9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21,38■■□□□ 1,01
Klhdc3Q8VEM9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21,38■■□□□ 1,01
Klhdc3Q8VEM9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 Gm43863-201ENSMUST00000203822 1192 ntBASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 Gm6206-201ENSMUST00000133472 2199 ntBASIC21,37■■□□□ 1,01
Klhdc3Q8VEM9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21,36■■□□□ 1,01
Klhdc3Q8VEM9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Klhdc3Q8VEM9 Gm24970-201ENSMUST00000175582 82 ntBASIC21,36■■□□□ 1,01
Klhdc3Q8VEM9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Klhdc3Q8VEM9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Klhdc3Q8VEM9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Klhdc3Q8VEM9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21,35■■□□□ 1,01
Klhdc3Q8VEM9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21,34■■□□□ 1,01
Klhdc3Q8VEM9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21,34■■□□□ 1,01
Klhdc3Q8VEM9 Gm43445-201ENSMUST00000198564 2091 ntBASIC21,33■■□□□ 1
Klhdc3Q8VEM9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1
Klhdc3Q8VEM9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,32■■□□□ 1
Klhdc3Q8VEM9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21,32■■□□□ 1
Klhdc3Q8VEM9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21,31■■□□□ 1
Klhdc3Q8VEM9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21,31■■□□□ 1
Klhdc3Q8VEM9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21,3■■□□□ 1
Klhdc3Q8VEM9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21,3■■□□□ 1
Klhdc3Q8VEM9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21,3■■□□□ 1
Klhdc3Q8VEM9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21,29■■□□□ 1
Klhdc3Q8VEM9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Klhdc3Q8VEM9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Klhdc3Q8VEM9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21,28■■□□□ 1
Klhdc3Q8VEM9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21,28■■□□□ 1
Klhdc3Q8VEM9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21,28■■□□□ 1
Klhdc3Q8VEM9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Klhdc3Q8VEM9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21,27■■□□□ 1
Klhdc3Q8VEM9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21,27■■□□□ 1
Klhdc3Q8VEM9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21,27■■□□□ 1
Klhdc3Q8VEM9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Klhdc3Q8VEM9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21,26■□□□□ 0,99
Klhdc3Q8VEM9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21,26■□□□□ 0,99
Klhdc3Q8VEM9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Klhdc3Q8VEM9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Klhdc3Q8VEM9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Klhdc3Q8VEM9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Klhdc3Q8VEM9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21,24■□□□□ 0,99
Klhdc3Q8VEM9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21,24■□□□□ 0,99
Klhdc3Q8VEM9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Klhdc3Q8VEM9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21,23■□□□□ 0,99
Klhdc3Q8VEM9 AC157572.2-201ENSMUST00000226970 908 ntBASIC21,23■□□□□ 0,99
Klhdc3Q8VEM9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Klhdc3Q8VEM9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21,23■□□□□ 0,99
Klhdc3Q8VEM9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21,23■□□□□ 0,99
Klhdc3Q8VEM9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Klhdc3Q8VEM9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Klhdc3Q8VEM9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21,2■□□□□ 0,98
Klhdc3Q8VEM9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21,2■□□□□ 0,98
Klhdc3Q8VEM9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Klhdc3Q8VEM9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21,19■□□□□ 0,98
Klhdc3Q8VEM9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21,18■□□□□ 0,98
Klhdc3Q8VEM9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Klhdc3Q8VEM9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21,18■□□□□ 0,98
Klhdc3Q8VEM9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21,18■□□□□ 0,98
Klhdc3Q8VEM9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21,18■□□□□ 0,98
Klhdc3Q8VEM9 Gm9905-201ENSMUST00000065740 1845 ntBASIC21,18■□□□□ 0,98
Klhdc3Q8VEM9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Klhdc3Q8VEM9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Klhdc3Q8VEM9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Klhdc3Q8VEM9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Klhdc3Q8VEM9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21,16■□□□□ 0,98
Klhdc3Q8VEM9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21,15■□□□□ 0,98
Klhdc3Q8VEM9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Klhdc3Q8VEM9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,98
Klhdc3Q8VEM9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,98
Klhdc3Q8VEM9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Klhdc3Q8VEM9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Klhdc3Q8VEM9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Klhdc3Q8VEM9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Klhdc3Q8VEM9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms