Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Zxda-201ENSMUST00000117281 2621 ntBASIC25.53■■□□□ 1.68
Sh3kbp1Q8R550 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh3kbp1Q8R550 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3kbp1Q8R550 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3kbp1Q8R550 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3kbp1Q8R550 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3kbp1Q8R550 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Sh3kbp1Q8R550 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3kbp1Q8R550 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3kbp1Q8R550 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Sh3kbp1Q8R550 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sh3kbp1Q8R550 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.48■■□□□ 1.67
Sh3kbp1Q8R550 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sh3kbp1Q8R550 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Sh3kbp1Q8R550 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3kbp1Q8R550 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sh3kbp1Q8R550 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.44■■□□□ 1.66
Sh3kbp1Q8R550 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Sh3kbp1Q8R550 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3kbp1Q8R550 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.41■■□□□ 1.66
Sh3kbp1Q8R550 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3kbp1Q8R550 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.38■■□□□ 1.65
Sh3kbp1Q8R550 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sh3kbp1Q8R550 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3kbp1Q8R550 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3kbp1Q8R550 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3kbp1Q8R550 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3kbp1Q8R550 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3kbp1Q8R550 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Sh3kbp1Q8R550 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Sh3kbp1Q8R550 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3kbp1Q8R550 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.33■■□□□ 1.65
Sh3kbp1Q8R550 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.33■■□□□ 1.65
Sh3kbp1Q8R550 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
Sh3kbp1Q8R550 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3kbp1Q8R550 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3kbp1Q8R550 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3kbp1Q8R550 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3kbp1Q8R550 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3kbp1Q8R550 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.29■■□□□ 1.64
Sh3kbp1Q8R550 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3kbp1Q8R550 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3kbp1Q8R550 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3kbp1Q8R550 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3kbp1Q8R550 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sh3kbp1Q8R550 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sh3kbp1Q8R550 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Sh3kbp1Q8R550 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sh3kbp1Q8R550 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.22■■□□□ 1.63
Sh3kbp1Q8R550 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3kbp1Q8R550 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Sh3kbp1Q8R550 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3kbp1Q8R550 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Sh3kbp1Q8R550 Gm8503-201ENSMUST00000118131 455 ntBASIC25.18■■□□□ 1.62
Sh3kbp1Q8R550 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Sh3kbp1Q8R550 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sh3kbp1Q8R550 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3kbp1Q8R550 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3kbp1Q8R550 Gm6821-201ENSMUST00000107540 542 ntBASIC25.15■■□□□ 1.62
Sh3kbp1Q8R550 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.15■■□□□ 1.62
Sh3kbp1Q8R550 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sh3kbp1Q8R550 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3kbp1Q8R550 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.12■■□□□ 1.61
Sh3kbp1Q8R550 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3kbp1Q8R550 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3kbp1Q8R550 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3kbp1Q8R550 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3kbp1Q8R550 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3kbp1Q8R550 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sh3kbp1Q8R550 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3kbp1Q8R550 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3kbp1Q8R550 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3kbp1Q8R550 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.05■■□□□ 1.6
Sh3kbp1Q8R550 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3kbp1Q8R550 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sh3kbp1Q8R550 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sh3kbp1Q8R550 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3kbp1Q8R550 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3kbp1Q8R550 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3kbp1Q8R550 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms