Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Zxda-201ENSMUST00000117281 2621 ntBASIC25.53■■□□□ 1.68
Sh3kbp1Q8R550 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh3kbp1Q8R550 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3kbp1Q8R550 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3kbp1Q8R550 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3kbp1Q8R550 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3kbp1Q8R550 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Sh3kbp1Q8R550 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3kbp1Q8R550 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3kbp1Q8R550 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Sh3kbp1Q8R550 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sh3kbp1Q8R550 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.48■■□□□ 1.67
Sh3kbp1Q8R550 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sh3kbp1Q8R550 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Sh3kbp1Q8R550 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3kbp1Q8R550 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sh3kbp1Q8R550 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.44■■□□□ 1.66
Sh3kbp1Q8R550 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Sh3kbp1Q8R550 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3kbp1Q8R550 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.41■■□□□ 1.66
Sh3kbp1Q8R550 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sh3kbp1Q8R550 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.38■■□□□ 1.65
Sh3kbp1Q8R550 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sh3kbp1Q8R550 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3kbp1Q8R550 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3kbp1Q8R550 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3kbp1Q8R550 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3kbp1Q8R550 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3kbp1Q8R550 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Sh3kbp1Q8R550 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Sh3kbp1Q8R550 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3kbp1Q8R550 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.33■■□□□ 1.65
Sh3kbp1Q8R550 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.33■■□□□ 1.65
Sh3kbp1Q8R550 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
Sh3kbp1Q8R550 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3kbp1Q8R550 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3kbp1Q8R550 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3kbp1Q8R550 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sh3kbp1Q8R550 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3kbp1Q8R550 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.29■■□□□ 1.64
Sh3kbp1Q8R550 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3kbp1Q8R550 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3kbp1Q8R550 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3kbp1Q8R550 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Sh3kbp1Q8R550 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Sh3kbp1Q8R550 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sh3kbp1Q8R550 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3kbp1Q8R550 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sh3kbp1Q8R550 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Sh3kbp1Q8R550 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sh3kbp1Q8R550 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.22■■□□□ 1.63
Sh3kbp1Q8R550 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3kbp1Q8R550 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Sh3kbp1Q8R550 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3kbp1Q8R550 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Sh3kbp1Q8R550 Gm8503-201ENSMUST00000118131 455 ntBASIC25.18■■□□□ 1.62
Sh3kbp1Q8R550 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Sh3kbp1Q8R550 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sh3kbp1Q8R550 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3kbp1Q8R550 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3kbp1Q8R550 Gm6821-201ENSMUST00000107540 542 ntBASIC25.15■■□□□ 1.62
Sh3kbp1Q8R550 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.15■■□□□ 1.62
Sh3kbp1Q8R550 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.14■■□□□ 1.62
Sh3kbp1Q8R550 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sh3kbp1Q8R550 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sh3kbp1Q8R550 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sh3kbp1Q8R550 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.12■■□□□ 1.61
Sh3kbp1Q8R550 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3kbp1Q8R550 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3kbp1Q8R550 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3kbp1Q8R550 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3kbp1Q8R550 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3kbp1Q8R550 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Sh3kbp1Q8R550 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3kbp1Q8R550 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3kbp1Q8R550 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3kbp1Q8R550 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.05■■□□□ 1.6
Sh3kbp1Q8R550 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3kbp1Q8R550 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sh3kbp1Q8R550 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sh3kbp1Q8R550 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3kbp1Q8R550 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3kbp1Q8R550 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3kbp1Q8R550 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3kbp1Q8R550 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms