Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ubqln1Q8R317 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ubqln1Q8R317 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ubqln1Q8R317 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ubqln1Q8R317 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ubqln1Q8R317 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.36■■□□□ 1.33
Ubqln1Q8R317 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.35■■□□□ 1.33
Ubqln1Q8R317 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ubqln1Q8R317 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubqln1Q8R317 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ubqln1Q8R317 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ubqln1Q8R317 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.34■■□□□ 1.33
Ubqln1Q8R317 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ubqln1Q8R317 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ubqln1Q8R317 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ubqln1Q8R317 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ubqln1Q8R317 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.32■■□□□ 1.32
Ubqln1Q8R317 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ubqln1Q8R317 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ubqln1Q8R317 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.32■■□□□ 1.32
Ubqln1Q8R317 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ubqln1Q8R317 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Ubqln1Q8R317 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.29■■□□□ 1.32
Ubqln1Q8R317 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ubqln1Q8R317 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ubqln1Q8R317 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.28■■□□□ 1.32
Ubqln1Q8R317 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.28■■□□□ 1.32
Ubqln1Q8R317 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ubqln1Q8R317 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Ubqln1Q8R317 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ubqln1Q8R317 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubqln1Q8R317 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ubqln1Q8R317 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.23■■□□□ 1.31
Ubqln1Q8R317 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ubqln1Q8R317 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubqln1Q8R317 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ubqln1Q8R317 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.22■■□□□ 1.31
Ubqln1Q8R317 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Ubqln1Q8R317 Gm9397-201ENSMUST00000200125 605 ntBASIC23.2■■□□□ 1.3
Ubqln1Q8R317 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ubqln1Q8R317 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.17■■□□□ 1.3
Ubqln1Q8R317 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubqln1Q8R317 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubqln1Q8R317 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ubqln1Q8R317 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ubqln1Q8R317 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ubqln1Q8R317 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubqln1Q8R317 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.15■■□□□ 1.3
Ubqln1Q8R317 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ubqln1Q8R317 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.14■■□□□ 1.29
Ubqln1Q8R317 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ubqln1Q8R317 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubqln1Q8R317 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.13■■□□□ 1.29
Ubqln1Q8R317 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubqln1Q8R317 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.12■■□□□ 1.29
Ubqln1Q8R317 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ubqln1Q8R317 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubqln1Q8R317 Gm24970-201ENSMUST00000175582 82 ntBASIC23.11■■□□□ 1.29
Ubqln1Q8R317 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.11■■□□□ 1.29
Ubqln1Q8R317 Gm45855-201ENSMUST00000212546 880 ntBASIC23.11■■□□□ 1.29
Ubqln1Q8R317 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.1■■□□□ 1.29
Ubqln1Q8R317 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.1■■□□□ 1.29
Ubqln1Q8R317 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubqln1Q8R317 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubqln1Q8R317 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubqln1Q8R317 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Ubqln1Q8R317 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ubqln1Q8R317 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubqln1Q8R317 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ubqln1Q8R317 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubqln1Q8R317 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ubqln1Q8R317 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubqln1Q8R317 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubqln1Q8R317 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubqln1Q8R317 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.07■■□□□ 1.28
Ubqln1Q8R317 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Ubqln1Q8R317 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.07■■□□□ 1.28
Ubqln1Q8R317 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubqln1Q8R317 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ubqln1Q8R317 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubqln1Q8R317 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Ubqln1Q8R317 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.05■■□□□ 1.28
Ubqln1Q8R317 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubqln1Q8R317 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubqln1Q8R317 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubqln1Q8R317 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.02■■□□□ 1.28
Ubqln1Q8R317 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.02■■□□□ 1.28
Ubqln1Q8R317 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Ubqln1Q8R317 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubqln1Q8R317 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubqln1Q8R317 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ubqln1Q8R317 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubqln1Q8R317 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.99■■□□□ 1.27
Ubqln1Q8R317 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubqln1Q8R317 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ubqln1Q8R317 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.98■■□□□ 1.27
Ubqln1Q8R317 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ubqln1Q8R317 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubqln1Q8R317 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubqln1Q8R317 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms