Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
H2afjQ8R1M2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
H2afjQ8R1M2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.71■■□□□ 1.23
H2afjQ8R1M2 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.71■■□□□ 1.23
H2afjQ8R1M2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
H2afjQ8R1M2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
H2afjQ8R1M2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
H2afjQ8R1M2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
H2afjQ8R1M2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
H2afjQ8R1M2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
H2afjQ8R1M2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
H2afjQ8R1M2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
H2afjQ8R1M2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
H2afjQ8R1M2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
H2afjQ8R1M2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
H2afjQ8R1M2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
H2afjQ8R1M2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.64■■□□□ 1.21
H2afjQ8R1M2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
H2afjQ8R1M2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
H2afjQ8R1M2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2afjQ8R1M2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2afjQ8R1M2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
H2afjQ8R1M2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
H2afjQ8R1M2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afjQ8R1M2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afjQ8R1M2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.6■■□□□ 1.21
H2afjQ8R1M2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Gm16148-201ENSMUST00000119653 893 ntBASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
H2afjQ8R1M2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2afjQ8R1M2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
H2afjQ8R1M2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H2afjQ8R1M2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
H2afjQ8R1M2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
H2afjQ8R1M2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H2afjQ8R1M2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2afjQ8R1M2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
H2afjQ8R1M2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
H2afjQ8R1M2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H2afjQ8R1M2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H2afjQ8R1M2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
H2afjQ8R1M2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
H2afjQ8R1M2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
H2afjQ8R1M2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
H2afjQ8R1M2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.51■■□□□ 1.19
H2afjQ8R1M2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
H2afjQ8R1M2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
H2afjQ8R1M2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
H2afjQ8R1M2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.5■■□□□ 1.19
H2afjQ8R1M2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
H2afjQ8R1M2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
H2afjQ8R1M2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.48■■□□□ 1.19
H2afjQ8R1M2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
H2afjQ8R1M2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.47■■□□□ 1.19
H2afjQ8R1M2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
H2afjQ8R1M2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.46■■□□□ 1.19
H2afjQ8R1M2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
H2afjQ8R1M2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
H2afjQ8R1M2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
H2afjQ8R1M2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
H2afjQ8R1M2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
H2afjQ8R1M2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afjQ8R1M2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
H2afjQ8R1M2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
H2afjQ8R1M2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
H2afjQ8R1M2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
H2afjQ8R1M2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
H2afjQ8R1M2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
H2afjQ8R1M2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
H2afjQ8R1M2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
H2afjQ8R1M2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.38■■□□□ 1.17
H2afjQ8R1M2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afjQ8R1M2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.37■■□□□ 1.17
H2afjQ8R1M2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2afjQ8R1M2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2afjQ8R1M2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2afjQ8R1M2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
H2afjQ8R1M2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2afjQ8R1M2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
H2afjQ8R1M2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2afjQ8R1M2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
H2afjQ8R1M2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms