Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Clrn1Q8K445 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Clrn1Q8K445 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Clrn1Q8K445 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Clrn1Q8K445 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Clrn1Q8K445 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Clrn1Q8K445 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.33■■□□□ 1.33
Clrn1Q8K445 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Clrn1Q8K445 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Clrn1Q8K445 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Clrn1Q8K445 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Clrn1Q8K445 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.32■■□□□ 1.32
Clrn1Q8K445 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.31■■□□□ 1.32
Clrn1Q8K445 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.31■■□□□ 1.32
Clrn1Q8K445 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Clrn1Q8K445 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Clrn1Q8K445 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Clrn1Q8K445 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Clrn1Q8K445 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.28■■□□□ 1.32
Clrn1Q8K445 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Clrn1Q8K445 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Clrn1Q8K445 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Clrn1Q8K445 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.25■■□□□ 1.31
Clrn1Q8K445 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Clrn1Q8K445 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.25■■□□□ 1.31
Clrn1Q8K445 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Clrn1Q8K445 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clrn1Q8K445 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Clrn1Q8K445 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.22■■□□□ 1.31
Clrn1Q8K445 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Clrn1Q8K445 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clrn1Q8K445 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Clrn1Q8K445 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.21■■□□□ 1.31
Clrn1Q8K445 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.21■■□□□ 1.31
Clrn1Q8K445 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Clrn1Q8K445 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.2■■□□□ 1.3
Clrn1Q8K445 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Clrn1Q8K445 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Clrn1Q8K445 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Clrn1Q8K445 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clrn1Q8K445 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clrn1Q8K445 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Clrn1Q8K445 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Clrn1Q8K445 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clrn1Q8K445 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clrn1Q8K445 Gm9397-201ENSMUST00000200125 605 ntBASIC23.17■■□□□ 1.3
Clrn1Q8K445 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clrn1Q8K445 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.16■■□□□ 1.3
Clrn1Q8K445 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clrn1Q8K445 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.15■■□□□ 1.3
Clrn1Q8K445 Gm45855-201ENSMUST00000212546 880 ntBASIC23.15■■□□□ 1.3
Clrn1Q8K445 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Clrn1Q8K445 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clrn1Q8K445 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.12■■□□□ 1.29
Clrn1Q8K445 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clrn1Q8K445 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clrn1Q8K445 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Clrn1Q8K445 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clrn1Q8K445 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Clrn1Q8K445 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.1■■□□□ 1.29
Clrn1Q8K445 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.1■■□□□ 1.29
Clrn1Q8K445 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Clrn1Q8K445 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.09■■□□□ 1.29
Clrn1Q8K445 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.09■■□□□ 1.29
Clrn1Q8K445 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Clrn1Q8K445 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Clrn1Q8K445 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clrn1Q8K445 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clrn1Q8K445 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Clrn1Q8K445 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clrn1Q8K445 Gm24970-201ENSMUST00000175582 82 ntBASIC23.04■■□□□ 1.28
Clrn1Q8K445 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clrn1Q8K445 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Clrn1Q8K445 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Clrn1Q8K445 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clrn1Q8K445 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Clrn1Q8K445 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clrn1Q8K445 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Clrn1Q8K445 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Clrn1Q8K445 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Clrn1Q8K445 Amer2-203ENSMUST00000225247 2662 ntBASIC23.01■■□□□ 1.27
Clrn1Q8K445 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clrn1Q8K445 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clrn1Q8K445 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Clrn1Q8K445 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23■■□□□ 1.27
Clrn1Q8K445 AC157572.2-201ENSMUST00000226970 908 ntBASIC23■■□□□ 1.27
Clrn1Q8K445 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23■■□□□ 1.27
Clrn1Q8K445 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23■■□□□ 1.27
Clrn1Q8K445 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23■■□□□ 1.27
Clrn1Q8K445 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.99■■□□□ 1.27
Clrn1Q8K445 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn1Q8K445 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn1Q8K445 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clrn1Q8K445 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.98■■□□□ 1.27
Clrn1Q8K445 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
Clrn1Q8K445 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clrn1Q8K445 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clrn1Q8K445 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clrn1Q8K445 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Clrn1Q8K445 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms