Protein–RNA interactions for Protein: Q8K2X2

Rbm48, RNA-binding protein 48, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm48Q8K2X2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm48Q8K2X2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rbm48Q8K2X2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Rbm48Q8K2X2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rbm48Q8K2X2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rbm48Q8K2X2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.51■□□□□ 0.87
Rbm48Q8K2X2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm48Q8K2X2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm48Q8K2X2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm48Q8K2X2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm48Q8K2X2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rbm48Q8K2X2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm48Q8K2X2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm48Q8K2X2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rbm48Q8K2X2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm48Q8K2X2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rbm48Q8K2X2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm48Q8K2X2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rbm48Q8K2X2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm48Q8K2X2 Mipep-204ENSMUST00000225043 1548 ntBASIC20.44■□□□□ 0.86
Rbm48Q8K2X2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm48Q8K2X2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rbm48Q8K2X2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm48Q8K2X2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rbm48Q8K2X2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rbm48Q8K2X2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm48Q8K2X2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm48Q8K2X2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Rbm48Q8K2X2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rbm48Q8K2X2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm48Q8K2X2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.41■□□□□ 0.86
Rbm48Q8K2X2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm48Q8K2X2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rbm48Q8K2X2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm48Q8K2X2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.4■□□□□ 0.86
Rbm48Q8K2X2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rbm48Q8K2X2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm48Q8K2X2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm48Q8K2X2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rbm48Q8K2X2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rbm48Q8K2X2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Rbm48Q8K2X2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm48Q8K2X2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rbm48Q8K2X2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Rbm48Q8K2X2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm48Q8K2X2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rbm48Q8K2X2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rbm48Q8K2X2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rbm48Q8K2X2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rbm48Q8K2X2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rbm48Q8K2X2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Rbm48Q8K2X2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rbm48Q8K2X2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rbm48Q8K2X2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rbm48Q8K2X2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
Rbm48Q8K2X2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rbm48Q8K2X2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rbm48Q8K2X2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rbm48Q8K2X2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm48Q8K2X2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm48Q8K2X2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm48Q8K2X2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rbm48Q8K2X2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm48Q8K2X2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rbm48Q8K2X2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.27■□□□□ 0.84
Rbm48Q8K2X2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Rbm48Q8K2X2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rbm48Q8K2X2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm48Q8K2X2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm48Q8K2X2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rbm48Q8K2X2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm48Q8K2X2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rbm48Q8K2X2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rbm48Q8K2X2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rbm48Q8K2X2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rbm48Q8K2X2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm48Q8K2X2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm48Q8K2X2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm48Q8K2X2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rbm48Q8K2X2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rbm48Q8K2X2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rbm48Q8K2X2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Rbm48Q8K2X2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm48Q8K2X2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rbm48Q8K2X2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.2■□□□□ 0.82
Rbm48Q8K2X2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm48Q8K2X2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm48Q8K2X2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm48Q8K2X2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rbm48Q8K2X2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rbm48Q8K2X2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm48Q8K2X2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rbm48Q8K2X2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Rbm48Q8K2X2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm48Q8K2X2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.16■□□□□ 0.82
Rbm48Q8K2X2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.16■□□□□ 0.82
Rbm48Q8K2X2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rbm48Q8K2X2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rbm48Q8K2X2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rbm48Q8K2X2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms