Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Kdm1bQ8CIG3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.93■■□□□ 1.74
Kdm1bQ8CIG3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1bQ8CIG3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Kdm1bQ8CIG3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Kdm1bQ8CIG3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.91■■□□□ 1.74
Kdm1bQ8CIG3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Kdm1bQ8CIG3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Kdm1bQ8CIG3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Kdm1bQ8CIG3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Kdm1bQ8CIG3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Kdm1bQ8CIG3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Kdm1bQ8CIG3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Kdm1bQ8CIG3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Kdm1bQ8CIG3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Kdm1bQ8CIG3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Kdm1bQ8CIG3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1bQ8CIG3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1bQ8CIG3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1bQ8CIG3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1bQ8CIG3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Kdm1bQ8CIG3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Kdm1bQ8CIG3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Kdm1bQ8CIG3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Kdm1bQ8CIG3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Kdm1bQ8CIG3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
Kdm1bQ8CIG3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
Kdm1bQ8CIG3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Kdm1bQ8CIG3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.83■■□□□ 1.72
Kdm1bQ8CIG3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
Kdm1bQ8CIG3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kdm1bQ8CIG3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Kdm1bQ8CIG3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Kdm1bQ8CIG3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Kdm1bQ8CIG3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Kdm1bQ8CIG3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Kdm1bQ8CIG3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Kdm1bQ8CIG3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Kdm1bQ8CIG3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Kdm1bQ8CIG3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Kdm1bQ8CIG3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Kdm1bQ8CIG3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Kdm1bQ8CIG3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.75■■□□□ 1.71
Kdm1bQ8CIG3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Kdm1bQ8CIG3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Kdm1bQ8CIG3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.73■■□□□ 1.71
Kdm1bQ8CIG3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Kdm1bQ8CIG3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Kdm1bQ8CIG3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.71■■□□□ 1.71
Kdm1bQ8CIG3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Kdm1bQ8CIG3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Kdm1bQ8CIG3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Kdm1bQ8CIG3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Kdm1bQ8CIG3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Kdm1bQ8CIG3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Kdm1bQ8CIG3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Kdm1bQ8CIG3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Kdm1bQ8CIG3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.67■■□□□ 1.7
Kdm1bQ8CIG3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Kdm1bQ8CIG3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Kdm1bQ8CIG3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Kdm1bQ8CIG3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Kdm1bQ8CIG3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Kdm1bQ8CIG3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.65■■□□□ 1.7
Kdm1bQ8CIG3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Kdm1bQ8CIG3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Kdm1bQ8CIG3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Kdm1bQ8CIG3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Kdm1bQ8CIG3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.61■■□□□ 1.69
Kdm1bQ8CIG3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Kdm1bQ8CIG3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Kdm1bQ8CIG3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Kdm1bQ8CIG3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.59■■□□□ 1.69
Kdm1bQ8CIG3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Kdm1bQ8CIG3 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.58■■□□□ 1.69
Kdm1bQ8CIG3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Kdm1bQ8CIG3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Kdm1bQ8CIG3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Kdm1bQ8CIG3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Kdm1bQ8CIG3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Kdm1bQ8CIG3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Kdm1bQ8CIG3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kdm1bQ8CIG3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kdm1bQ8CIG3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kdm1bQ8CIG3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kdm1bQ8CIG3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kdm1bQ8CIG3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kdm1bQ8CIG3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Kdm1bQ8CIG3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Kdm1bQ8CIG3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Kdm1bQ8CIG3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Kdm1bQ8CIG3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.5■■□□□ 1.67
Kdm1bQ8CIG3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.5■■□□□ 1.67
Kdm1bQ8CIG3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Kdm1bQ8CIG3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Kdm1bQ8CIG3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Kdm1bQ8CIG3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.47■■□□□ 1.67
Kdm1bQ8CIG3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Kdm1bQ8CIG3 Zfp131-205ENSMUST00000223812 663 ntBASIC25.47■■□□□ 1.67
Kdm1bQ8CIG3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms