Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist3h2bbQ8CGP0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist3h2bbQ8CGP0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist3h2bbQ8CGP0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hist3h2bbQ8CGP0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist3h2bbQ8CGP0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist3h2bbQ8CGP0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist3h2bbQ8CGP0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist3h2bbQ8CGP0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.93■□□□□ 0.62
Hist3h2bbQ8CGP0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hist3h2bbQ8CGP0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.92■□□□□ 0.62
Hist3h2bbQ8CGP0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hist3h2bbQ8CGP0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist3h2bbQ8CGP0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist3h2bbQ8CGP0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist3h2bbQ8CGP0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist3h2bbQ8CGP0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist3h2bbQ8CGP0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist3h2bbQ8CGP0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Hist3h2bbQ8CGP0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist3h2bbQ8CGP0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist3h2bbQ8CGP0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist3h2bbQ8CGP0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist3h2bbQ8CGP0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist3h2bbQ8CGP0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hist3h2bbQ8CGP0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist3h2bbQ8CGP0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist3h2bbQ8CGP0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist3h2bbQ8CGP0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist3h2bbQ8CGP0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist3h2bbQ8CGP0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist3h2bbQ8CGP0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hist3h2bbQ8CGP0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist3h2bbQ8CGP0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hist3h2bbQ8CGP0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist3h2bbQ8CGP0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hist3h2bbQ8CGP0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hist3h2bbQ8CGP0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hist3h2bbQ8CGP0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.83■□□□□ 0.61
Hist3h2bbQ8CGP0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hist3h2bbQ8CGP0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hist3h2bbQ8CGP0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hist3h2bbQ8CGP0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Hist3h2bbQ8CGP0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hist3h2bbQ8CGP0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hist3h2bbQ8CGP0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hist3h2bbQ8CGP0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.81■□□□□ 0.6
Hist3h2bbQ8CGP0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hist3h2bbQ8CGP0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hist3h2bbQ8CGP0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hist3h2bbQ8CGP0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hist3h2bbQ8CGP0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hist3h2bbQ8CGP0 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.79■□□□□ 0.6
Hist3h2bbQ8CGP0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hist3h2bbQ8CGP0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hist3h2bbQ8CGP0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hist3h2bbQ8CGP0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hist3h2bbQ8CGP0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hist3h2bbQ8CGP0 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.78■□□□□ 0.6
Hist3h2bbQ8CGP0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hist3h2bbQ8CGP0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hist3h2bbQ8CGP0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hist3h2bbQ8CGP0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hist3h2bbQ8CGP0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hist3h2bbQ8CGP0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hist3h2bbQ8CGP0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hist3h2bbQ8CGP0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hist3h2bbQ8CGP0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hist3h2bbQ8CGP0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hist3h2bbQ8CGP0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hist3h2bbQ8CGP0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hist3h2bbQ8CGP0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hist3h2bbQ8CGP0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.71■□□□□ 0.59
Hist3h2bbQ8CGP0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hist3h2bbQ8CGP0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hist3h2bbQ8CGP0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.7■□□□□ 0.58
Hist3h2bbQ8CGP0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hist3h2bbQ8CGP0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hist3h2bbQ8CGP0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hist3h2bbQ8CGP0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hist3h2bbQ8CGP0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hist3h2bbQ8CGP0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist3h2bbQ8CGP0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hist3h2bbQ8CGP0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hist3h2bbQ8CGP0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hist3h2bbQ8CGP0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hist3h2bbQ8CGP0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist3h2bbQ8CGP0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hist3h2bbQ8CGP0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.66■□□□□ 0.58
Hist3h2bbQ8CGP0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist3h2bbQ8CGP0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist3h2bbQ8CGP0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Hist3h2bbQ8CGP0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist3h2bbQ8CGP0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hist3h2bbQ8CGP0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hist3h2bbQ8CGP0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.64■□□□□ 0.57
Hist3h2bbQ8CGP0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hist3h2bbQ8CGP0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist3h2bbQ8CGP0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hist3h2bbQ8CGP0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms