Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Polr2bQ8CFI7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Polr2bQ8CFI7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Polr2bQ8CFI7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Polr2bQ8CFI7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Polr2bQ8CFI7 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.72■■□□□ 1.87
Polr2bQ8CFI7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Polr2bQ8CFI7 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.71■■□□□ 1.87
Polr2bQ8CFI7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Polr2bQ8CFI7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.7■■□□□ 1.86
Polr2bQ8CFI7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.7■■□□□ 1.86
Polr2bQ8CFI7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.69■■□□□ 1.86
Polr2bQ8CFI7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Polr2bQ8CFI7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.69■■□□□ 1.86
Polr2bQ8CFI7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Polr2bQ8CFI7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.68■■□□□ 1.86
Polr2bQ8CFI7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
Polr2bQ8CFI7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Polr2bQ8CFI7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Polr2bQ8CFI7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Polr2bQ8CFI7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Polr2bQ8CFI7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Polr2bQ8CFI7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Polr2bQ8CFI7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Polr2bQ8CFI7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Polr2bQ8CFI7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Polr2bQ8CFI7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Polr2bQ8CFI7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Polr2bQ8CFI7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Polr2bQ8CFI7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Polr2bQ8CFI7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.61■■□□□ 1.85
Polr2bQ8CFI7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.61■■□□□ 1.85
Polr2bQ8CFI7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Polr2bQ8CFI7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Polr2bQ8CFI7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Polr2bQ8CFI7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Polr2bQ8CFI7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Polr2bQ8CFI7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Polr2bQ8CFI7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.58■■□□□ 1.84
Polr2bQ8CFI7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.84
Polr2bQ8CFI7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Polr2bQ8CFI7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Polr2bQ8CFI7 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.57■■□□□ 1.84
Polr2bQ8CFI7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Polr2bQ8CFI7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Polr2bQ8CFI7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Polr2bQ8CFI7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Polr2bQ8CFI7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Polr2bQ8CFI7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.52■■□□□ 1.84
Polr2bQ8CFI7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Polr2bQ8CFI7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Polr2bQ8CFI7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.5■■□□□ 1.83
Polr2bQ8CFI7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Polr2bQ8CFI7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Polr2bQ8CFI7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Polr2bQ8CFI7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Polr2bQ8CFI7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Polr2bQ8CFI7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Polr2bQ8CFI7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Polr2bQ8CFI7 Zxda-201ENSMUST00000117281 2621 ntBASIC26.46■■□□□ 1.83
Polr2bQ8CFI7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Polr2bQ8CFI7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Polr2bQ8CFI7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Polr2bQ8CFI7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Polr2bQ8CFI7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Polr2bQ8CFI7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Polr2bQ8CFI7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
Polr2bQ8CFI7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.4■■□□□ 1.82
Polr2bQ8CFI7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Polr2bQ8CFI7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Polr2bQ8CFI7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.37■■□□□ 1.81
Polr2bQ8CFI7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.36■■□□□ 1.81
Polr2bQ8CFI7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.35■■□□□ 1.81
Polr2bQ8CFI7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Polr2bQ8CFI7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Polr2bQ8CFI7 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.34■■□□□ 1.81
Polr2bQ8CFI7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Polr2bQ8CFI7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Polr2bQ8CFI7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Polr2bQ8CFI7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Polr2bQ8CFI7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Polr2bQ8CFI7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Polr2bQ8CFI7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Polr2bQ8CFI7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Polr2bQ8CFI7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.26■■□□□ 1.79
Polr2bQ8CFI7 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.26■■□□□ 1.79
Polr2bQ8CFI7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.26■■□□□ 1.79
Polr2bQ8CFI7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Polr2bQ8CFI7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Polr2bQ8CFI7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Polr2bQ8CFI7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Polr2bQ8CFI7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Polr2bQ8CFI7 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 282 ms