Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lysmd4Q8CC84 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lysmd4Q8CC84 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd4Q8CC84 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd4Q8CC84 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lysmd4Q8CC84 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Lysmd4Q8CC84 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lysmd4Q8CC84 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.25■■□□□ 1.15
Lysmd4Q8CC84 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Lysmd4Q8CC84 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.25■■□□□ 1.15
Lysmd4Q8CC84 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd4Q8CC84 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd4Q8CC84 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lysmd4Q8CC84 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lysmd4Q8CC84 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lysmd4Q8CC84 Gm27322-201ENSMUST00000184007 104 ntBASIC22.23■■□□□ 1.15
Lysmd4Q8CC84 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Lysmd4Q8CC84 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Lysmd4Q8CC84 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Lysmd4Q8CC84 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Lysmd4Q8CC84 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lysmd4Q8CC84 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lysmd4Q8CC84 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lysmd4Q8CC84 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.21■■□□□ 1.15
Lysmd4Q8CC84 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lysmd4Q8CC84 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Lysmd4Q8CC84 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lysmd4Q8CC84 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.19■■□□□ 1.14
Lysmd4Q8CC84 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lysmd4Q8CC84 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lysmd4Q8CC84 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.18■■□□□ 1.14
Lysmd4Q8CC84 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Lysmd4Q8CC84 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Lysmd4Q8CC84 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lysmd4Q8CC84 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lysmd4Q8CC84 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lysmd4Q8CC84 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lysmd4Q8CC84 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lysmd4Q8CC84 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Lysmd4Q8CC84 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Lysmd4Q8CC84 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.12■■□□□ 1.13
Lysmd4Q8CC84 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lysmd4Q8CC84 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Lysmd4Q8CC84 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lysmd4Q8CC84 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lysmd4Q8CC84 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lysmd4Q8CC84 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lysmd4Q8CC84 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lysmd4Q8CC84 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lysmd4Q8CC84 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lysmd4Q8CC84 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lysmd4Q8CC84 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lysmd4Q8CC84 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lysmd4Q8CC84 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lysmd4Q8CC84 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Lysmd4Q8CC84 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lysmd4Q8CC84 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Lysmd4Q8CC84 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Lysmd4Q8CC84 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lysmd4Q8CC84 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Lysmd4Q8CC84 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lysmd4Q8CC84 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lysmd4Q8CC84 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lysmd4Q8CC84 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lysmd4Q8CC84 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Lysmd4Q8CC84 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Lysmd4Q8CC84 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd4Q8CC84 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd4Q8CC84 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd4Q8CC84 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd4Q8CC84 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd4Q8CC84 Peli2-204ENSMUST00000226513 1320 ntBASIC21.99■■□□□ 1.11
Lysmd4Q8CC84 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lysmd4Q8CC84 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Lysmd4Q8CC84 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lysmd4Q8CC84 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lysmd4Q8CC84 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
Lysmd4Q8CC84 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.95■■□□□ 1.1
Lysmd4Q8CC84 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Lysmd4Q8CC84 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lysmd4Q8CC84 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lysmd4Q8CC84 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lysmd4Q8CC84 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd4Q8CC84 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd4Q8CC84 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lysmd4Q8CC84 Gm26115-201ENSMUST00000175605 87 ntBASIC21.92■■□□□ 1.1
Lysmd4Q8CC84 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.91■■□□□ 1.1
Lysmd4Q8CC84 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd4Q8CC84 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd4Q8CC84 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lysmd4Q8CC84 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Lysmd4Q8CC84 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lysmd4Q8CC84 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Lysmd4Q8CC84 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd4Q8CC84 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
Lysmd4Q8CC84 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lysmd4Q8CC84 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Lysmd4Q8CC84 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Lysmd4Q8CC84 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lysmd4Q8CC84 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms