Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Shisa4Q8CA71 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Shisa4Q8CA71 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
Shisa4Q8CA71 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Shisa4Q8CA71 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.5■■■□□ 2.31
Shisa4Q8CA71 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Shisa4Q8CA71 Zxda-201ENSMUST00000117281 2621 ntBASIC29.49■■■□□ 2.31
Shisa4Q8CA71 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shisa4Q8CA71 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shisa4Q8CA71 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Shisa4Q8CA71 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Shisa4Q8CA71 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Shisa4Q8CA71 Gm45855-201ENSMUST00000212546 880 ntBASIC29.46■■■□□ 2.31
Shisa4Q8CA71 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.45■■■□□ 2.31
Shisa4Q8CA71 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Shisa4Q8CA71 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
Shisa4Q8CA71 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Shisa4Q8CA71 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Shisa4Q8CA71 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.42■■■□□ 2.3
Shisa4Q8CA71 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.42■■■□□ 2.3
Shisa4Q8CA71 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Shisa4Q8CA71 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.4■■■□□ 2.3
Shisa4Q8CA71 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Shisa4Q8CA71 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.39■■■□□ 2.3
Shisa4Q8CA71 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
Shisa4Q8CA71 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.39■■■□□ 2.29
Shisa4Q8CA71 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
Shisa4Q8CA71 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Shisa4Q8CA71 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shisa4Q8CA71 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Shisa4Q8CA71 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Shisa4Q8CA71 Gm24970-201ENSMUST00000175582 82 ntBASIC29.34■■■□□ 2.29
Shisa4Q8CA71 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.34■■■□□ 2.29
Shisa4Q8CA71 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Shisa4Q8CA71 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.33■■■□□ 2.29
Shisa4Q8CA71 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Shisa4Q8CA71 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Shisa4Q8CA71 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shisa4Q8CA71 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.31■■■□□ 2.28
Shisa4Q8CA71 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.31■■■□□ 2.28
Shisa4Q8CA71 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shisa4Q8CA71 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shisa4Q8CA71 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
Shisa4Q8CA71 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shisa4Q8CA71 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.29■■■□□ 2.28
Shisa4Q8CA71 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Shisa4Q8CA71 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
Shisa4Q8CA71 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Shisa4Q8CA71 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.26■■■□□ 2.28
Shisa4Q8CA71 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Shisa4Q8CA71 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Shisa4Q8CA71 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Shisa4Q8CA71 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Shisa4Q8CA71 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Shisa4Q8CA71 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Shisa4Q8CA71 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Shisa4Q8CA71 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Shisa4Q8CA71 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.22■■■□□ 2.27
Shisa4Q8CA71 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Shisa4Q8CA71 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
Shisa4Q8CA71 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.21■■■□□ 2.27
Shisa4Q8CA71 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
Shisa4Q8CA71 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Shisa4Q8CA71 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Shisa4Q8CA71 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Shisa4Q8CA71 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Shisa4Q8CA71 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.17■■■□□ 2.26
Shisa4Q8CA71 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shisa4Q8CA71 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.16■■■□□ 2.26
Shisa4Q8CA71 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.15■■■□□ 2.26
Shisa4Q8CA71 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Shisa4Q8CA71 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Shisa4Q8CA71 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Shisa4Q8CA71 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Shisa4Q8CA71 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.13■■■□□ 2.25
Shisa4Q8CA71 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Shisa4Q8CA71 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Shisa4Q8CA71 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.12■■■□□ 2.25
Shisa4Q8CA71 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.12■■■□□ 2.25
Shisa4Q8CA71 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.11■■■□□ 2.25
Shisa4Q8CA71 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Shisa4Q8CA71 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Shisa4Q8CA71 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Shisa4Q8CA71 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Shisa4Q8CA71 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Shisa4Q8CA71 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Shisa4Q8CA71 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Shisa4Q8CA71 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Shisa4Q8CA71 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Shisa4Q8CA71 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.06■■■□□ 2.24
Shisa4Q8CA71 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Shisa4Q8CA71 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Shisa4Q8CA71 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.04■■■□□ 2.24
Shisa4Q8CA71 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.04■■■□□ 2.24
Shisa4Q8CA71 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Shisa4Q8CA71 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Shisa4Q8CA71 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Shisa4Q8CA71 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Shisa4Q8CA71 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Shisa4Q8CA71 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms