Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.5■□□□□ 0.55
Cphx2Q8BX39 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cphx2Q8BX39 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cphx2Q8BX39 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cphx2Q8BX39 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cphx2Q8BX39 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cphx2Q8BX39 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cphx2Q8BX39 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cphx2Q8BX39 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cphx2Q8BX39 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cphx2Q8BX39 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cphx2Q8BX39 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cphx2Q8BX39 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.43■□□□□ 0.54
Cphx2Q8BX39 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cphx2Q8BX39 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cphx2Q8BX39 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cphx2Q8BX39 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.42■□□□□ 0.54
Cphx2Q8BX39 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cphx2Q8BX39 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cphx2Q8BX39 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cphx2Q8BX39 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cphx2Q8BX39 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cphx2Q8BX39 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cphx2Q8BX39 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cphx2Q8BX39 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cphx2Q8BX39 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.39■□□□□ 0.53
Cphx2Q8BX39 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cphx2Q8BX39 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cphx2Q8BX39 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cphx2Q8BX39 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cphx2Q8BX39 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cphx2Q8BX39 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cphx2Q8BX39 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cphx2Q8BX39 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cphx2Q8BX39 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cphx2Q8BX39 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cphx2Q8BX39 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cphx2Q8BX39 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cphx2Q8BX39 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cphx2Q8BX39 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.34■□□□□ 0.53
Cphx2Q8BX39 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cphx2Q8BX39 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cphx2Q8BX39 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cphx2Q8BX39 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cphx2Q8BX39 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cphx2Q8BX39 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cphx2Q8BX39 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cphx2Q8BX39 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.32■□□□□ 0.52
Cphx2Q8BX39 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cphx2Q8BX39 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cphx2Q8BX39 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Cphx2Q8BX39 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.32■□□□□ 0.52
Cphx2Q8BX39 Amer2-203ENSMUST00000225247 2662 ntBASIC18.31■□□□□ 0.52
Cphx2Q8BX39 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cphx2Q8BX39 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cphx2Q8BX39 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cphx2Q8BX39 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cphx2Q8BX39 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cphx2Q8BX39 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cphx2Q8BX39 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Cphx2Q8BX39 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cphx2Q8BX39 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cphx2Q8BX39 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cphx2Q8BX39 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cphx2Q8BX39 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cphx2Q8BX39 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cphx2Q8BX39 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cphx2Q8BX39 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cphx2Q8BX39 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Cphx2Q8BX39 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cphx2Q8BX39 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cphx2Q8BX39 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cphx2Q8BX39 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cphx2Q8BX39 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cphx2Q8BX39 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cphx2Q8BX39 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.25■□□□□ 0.51
Cphx2Q8BX39 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cphx2Q8BX39 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.25■□□□□ 0.51
Cphx2Q8BX39 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cphx2Q8BX39 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cphx2Q8BX39 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cphx2Q8BX39 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cphx2Q8BX39 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.23■□□□□ 0.51
Cphx2Q8BX39 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cphx2Q8BX39 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cphx2Q8BX39 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cphx2Q8BX39 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cphx2Q8BX39 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cphx2Q8BX39 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.22■□□□□ 0.51
Cphx2Q8BX39 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cphx2Q8BX39 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cphx2Q8BX39 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cphx2Q8BX39 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cphx2Q8BX39 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms