Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Zfp131-205ENSMUST00000223812 663 ntBASIC26.3■■□□□ 1.8
Nop53Q8BK35 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nop53Q8BK35 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nop53Q8BK35 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Nop53Q8BK35 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Nop53Q8BK35 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.27■■□□□ 1.8
Nop53Q8BK35 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
Nop53Q8BK35 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nop53Q8BK35 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nop53Q8BK35 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Nop53Q8BK35 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nop53Q8BK35 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nop53Q8BK35 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nop53Q8BK35 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nop53Q8BK35 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nop53Q8BK35 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Nop53Q8BK35 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nop53Q8BK35 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nop53Q8BK35 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nop53Q8BK35 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nop53Q8BK35 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nop53Q8BK35 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nop53Q8BK35 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nop53Q8BK35 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Nop53Q8BK35 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nop53Q8BK35 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.15■■□□□ 1.78
Nop53Q8BK35 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Nop53Q8BK35 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nop53Q8BK35 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Nop53Q8BK35 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nop53Q8BK35 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Nop53Q8BK35 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Nop53Q8BK35 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Nop53Q8BK35 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Nop53Q8BK35 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Nop53Q8BK35 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
Nop53Q8BK35 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nop53Q8BK35 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nop53Q8BK35 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nop53Q8BK35 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.12■■□□□ 1.77
Nop53Q8BK35 Gm16148-201ENSMUST00000119653 893 ntBASIC26.11■■□□□ 1.77
Nop53Q8BK35 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Nop53Q8BK35 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.08■■□□□ 1.77
Nop53Q8BK35 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nop53Q8BK35 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Nop53Q8BK35 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Nop53Q8BK35 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nop53Q8BK35 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nop53Q8BK35 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.05■■□□□ 1.76
Nop53Q8BK35 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nop53Q8BK35 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.05■■□□□ 1.76
Nop53Q8BK35 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Nop53Q8BK35 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
Nop53Q8BK35 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.03■■□□□ 1.76
Nop53Q8BK35 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nop53Q8BK35 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nop53Q8BK35 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26■■□□□ 1.75
Nop53Q8BK35 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26■■□□□ 1.75
Nop53Q8BK35 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.99■■□□□ 1.75
Nop53Q8BK35 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nop53Q8BK35 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Nop53Q8BK35 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nop53Q8BK35 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Nop53Q8BK35 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.95■■□□□ 1.75
Nop53Q8BK35 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Nop53Q8BK35 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nop53Q8BK35 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nop53Q8BK35 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Nop53Q8BK35 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.92■■□□□ 1.74
Nop53Q8BK35 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nop53Q8BK35 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Nop53Q8BK35 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nop53Q8BK35 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Nop53Q8BK35 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Nop53Q8BK35 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Nop53Q8BK35 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nop53Q8BK35 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Nop53Q8BK35 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
Nop53Q8BK35 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nop53Q8BK35 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.89■■□□□ 1.74
Nop53Q8BK35 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nop53Q8BK35 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nop53Q8BK35 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Nop53Q8BK35 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Nop53Q8BK35 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nop53Q8BK35 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nop53Q8BK35 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Nop53Q8BK35 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Nop53Q8BK35 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nop53Q8BK35 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nop53Q8BK35 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Nop53Q8BK35 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Nop53Q8BK35 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Nop53Q8BK35 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms