Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Atpaf1Q811I0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atpaf1Q811I0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atpaf1Q811I0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atpaf1Q811I0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atpaf1Q811I0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Atpaf1Q811I0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atpaf1Q811I0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.12■□□□□ 0.81
Atpaf1Q811I0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Atpaf1Q811I0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.11■□□□□ 0.81
Atpaf1Q811I0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Atpaf1Q811I0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Atpaf1Q811I0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atpaf1Q811I0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atpaf1Q811I0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Atpaf1Q811I0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Atpaf1Q811I0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atpaf1Q811I0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atpaf1Q811I0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.09■□□□□ 0.81
Atpaf1Q811I0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atpaf1Q811I0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atpaf1Q811I0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Atpaf1Q811I0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Atpaf1Q811I0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atpaf1Q811I0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Atpaf1Q811I0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Atpaf1Q811I0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.03■□□□□ 0.8
Atpaf1Q811I0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atpaf1Q811I0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Atpaf1Q811I0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atpaf1Q811I0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.02■□□□□ 0.8
Atpaf1Q811I0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atpaf1Q811I0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atpaf1Q811I0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atpaf1Q811I0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.01■□□□□ 0.79
Atpaf1Q811I0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Atpaf1Q811I0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atpaf1Q811I0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atpaf1Q811I0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Atpaf1Q811I0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atpaf1Q811I0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atpaf1Q811I0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atpaf1Q811I0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atpaf1Q811I0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Atpaf1Q811I0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atpaf1Q811I0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Atpaf1Q811I0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atpaf1Q811I0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Atpaf1Q811I0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atpaf1Q811I0 Rab21-202ENSMUST00000218831 843 ntBASIC19.96■□□□□ 0.79
Atpaf1Q811I0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atpaf1Q811I0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atpaf1Q811I0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atpaf1Q811I0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atpaf1Q811I0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atpaf1Q811I0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Atpaf1Q811I0 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.93■□□□□ 0.78
Atpaf1Q811I0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atpaf1Q811I0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atpaf1Q811I0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Atpaf1Q811I0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atpaf1Q811I0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atpaf1Q811I0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Atpaf1Q811I0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atpaf1Q811I0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.89■□□□□ 0.77
Atpaf1Q811I0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atpaf1Q811I0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atpaf1Q811I0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atpaf1Q811I0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atpaf1Q811I0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atpaf1Q811I0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atpaf1Q811I0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atpaf1Q811I0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atpaf1Q811I0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atpaf1Q811I0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Atpaf1Q811I0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atpaf1Q811I0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atpaf1Q811I0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atpaf1Q811I0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atpaf1Q811I0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atpaf1Q811I0 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.84■□□□□ 0.77
Atpaf1Q811I0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atpaf1Q811I0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Atpaf1Q811I0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.83■□□□□ 0.77
Atpaf1Q811I0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atpaf1Q811I0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.83■□□□□ 0.77
Atpaf1Q811I0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atpaf1Q811I0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Atpaf1Q811I0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atpaf1Q811I0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Atpaf1Q811I0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atpaf1Q811I0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms