Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Shank2Q80Z38 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Shank2Q80Z38 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
Shank2Q80Z38 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
Shank2Q80Z38 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Shank2Q80Z38 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Shank2Q80Z38 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Shank2Q80Z38 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Shank2Q80Z38 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Shank2Q80Z38 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Shank2Q80Z38 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Shank2Q80Z38 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Shank2Q80Z38 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Shank2Q80Z38 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
Shank2Q80Z38 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Shank2Q80Z38 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Shank2Q80Z38 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Shank2Q80Z38 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC33.39■■■□□ 2.94
Shank2Q80Z38 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33.39■■■□□ 2.94
Shank2Q80Z38 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Shank2Q80Z38 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC33.36■■■□□ 2.93
Shank2Q80Z38 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC33.36■■■□□ 2.93
Shank2Q80Z38 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Shank2Q80Z38 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Shank2Q80Z38 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC33.35■■■□□ 2.93
Shank2Q80Z38 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Shank2Q80Z38 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC33.33■■■□□ 2.93
Shank2Q80Z38 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Shank2Q80Z38 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC33.32■■■□□ 2.93
Shank2Q80Z38 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Shank2Q80Z38 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Shank2Q80Z38 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Shank2Q80Z38 Cap2-205ENSMUST00000225824 1634 ntBASIC33.27■■■□□ 2.92
Shank2Q80Z38 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.92
Shank2Q80Z38 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC33.25■■■□□ 2.91
Shank2Q80Z38 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Shank2Q80Z38 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.22■■■□□ 2.91
Shank2Q80Z38 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
Shank2Q80Z38 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Shank2Q80Z38 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shank2Q80Z38 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shank2Q80Z38 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shank2Q80Z38 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Shank2Q80Z38 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC33.21■■■□□ 2.91
Shank2Q80Z38 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Shank2Q80Z38 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Shank2Q80Z38 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC33.19■■■□□ 2.9
Shank2Q80Z38 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.18■■■□□ 2.9
Shank2Q80Z38 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
Shank2Q80Z38 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Shank2Q80Z38 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Shank2Q80Z38 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC33.18■■■□□ 2.9
Shank2Q80Z38 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
Shank2Q80Z38 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Shank2Q80Z38 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Shank2Q80Z38 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Shank2Q80Z38 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
Shank2Q80Z38 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Shank2Q80Z38 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Shank2Q80Z38 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Shank2Q80Z38 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Shank2Q80Z38 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
Shank2Q80Z38 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC33.12■■■□□ 2.89
Shank2Q80Z38 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC33.12■■■□□ 2.89
Shank2Q80Z38 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Shank2Q80Z38 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Shank2Q80Z38 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Shank2Q80Z38 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Shank2Q80Z38 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Shank2Q80Z38 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Shank2Q80Z38 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Shank2Q80Z38 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Shank2Q80Z38 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC33.04■■■□□ 2.88
Shank2Q80Z38 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.03■■■□□ 2.88
Shank2Q80Z38 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Shank2Q80Z38 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
Shank2Q80Z38 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC33.02■■■□□ 2.88
Shank2Q80Z38 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC33■■■□□ 2.87
Shank2Q80Z38 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.98■■■□□ 2.87
Shank2Q80Z38 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Shank2Q80Z38 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Shank2Q80Z38 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
Shank2Q80Z38 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.96■■■□□ 2.87
Shank2Q80Z38 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.96■■■□□ 2.87
Shank2Q80Z38 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Shank2Q80Z38 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Shank2Q80Z38 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Shank2Q80Z38 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Shank2Q80Z38 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Shank2Q80Z38 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.93■■■□□ 2.86
Shank2Q80Z38 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Shank2Q80Z38 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Shank2Q80Z38 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC32.89■■■□□ 2.86
Shank2Q80Z38 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC32.89■■■□□ 2.86
Shank2Q80Z38 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Shank2Q80Z38 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Shank2Q80Z38 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.86■■■□□ 2.85
Shank2Q80Z38 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
Shank2Q80Z38 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
Shank2Q80Z38 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.83■■■□□ 2.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms