Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim36Q80WG7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim36Q80WG7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim36Q80WG7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim36Q80WG7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Trim36Q80WG7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim36Q80WG7 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.52■■□□□ 1.36
Trim36Q80WG7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim36Q80WG7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim36Q80WG7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.5■■□□□ 1.35
Trim36Q80WG7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.5■■□□□ 1.35
Trim36Q80WG7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Trim36Q80WG7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim36Q80WG7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
Trim36Q80WG7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim36Q80WG7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim36Q80WG7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim36Q80WG7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Trim36Q80WG7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Trim36Q80WG7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Trim36Q80WG7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trim36Q80WG7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim36Q80WG7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim36Q80WG7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim36Q80WG7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Trim36Q80WG7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim36Q80WG7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trim36Q80WG7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Trim36Q80WG7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim36Q80WG7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim36Q80WG7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim36Q80WG7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.38■■□□□ 1.33
Trim36Q80WG7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim36Q80WG7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim36Q80WG7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.37■■□□□ 1.33
Trim36Q80WG7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim36Q80WG7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim36Q80WG7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim36Q80WG7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim36Q80WG7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Trim36Q80WG7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim36Q80WG7 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.33■■□□□ 1.33
Trim36Q80WG7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Trim36Q80WG7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.32■■□□□ 1.32
Trim36Q80WG7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim36Q80WG7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim36Q80WG7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.31■■□□□ 1.32
Trim36Q80WG7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim36Q80WG7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Trim36Q80WG7 Gm45855-201ENSMUST00000212546 880 ntBASIC23.31■■□□□ 1.32
Trim36Q80WG7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim36Q80WG7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trim36Q80WG7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim36Q80WG7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim36Q80WG7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trim36Q80WG7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Trim36Q80WG7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim36Q80WG7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trim36Q80WG7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Trim36Q80WG7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim36Q80WG7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trim36Q80WG7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim36Q80WG7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim36Q80WG7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim36Q80WG7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Trim36Q80WG7 Gm9397-201ENSMUST00000200125 605 ntBASIC23.21■■□□□ 1.31
Trim36Q80WG7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trim36Q80WG7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim36Q80WG7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim36Q80WG7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim36Q80WG7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim36Q80WG7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim36Q80WG7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Trim36Q80WG7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim36Q80WG7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim36Q80WG7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim36Q80WG7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms