Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Srsf1Q6PDM2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Srsf1Q6PDM2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Srsf1Q6PDM2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Srsf1Q6PDM2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Srsf1Q6PDM2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Srsf1Q6PDM2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.02■■□□□ 1.12
Srsf1Q6PDM2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Srsf1Q6PDM2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Srsf1Q6PDM2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Srsf1Q6PDM2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Srsf1Q6PDM2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Srsf1Q6PDM2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Srsf1Q6PDM2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Srsf1Q6PDM2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Srsf1Q6PDM2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Srsf1Q6PDM2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Srsf1Q6PDM2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Srsf1Q6PDM2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Srsf1Q6PDM2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Srsf1Q6PDM2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Srsf1Q6PDM2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Srsf1Q6PDM2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.93■■□□□ 1.1
Srsf1Q6PDM2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.92■■□□□ 1.1
Srsf1Q6PDM2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Srsf1Q6PDM2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Srsf1Q6PDM2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srsf1Q6PDM2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Srsf1Q6PDM2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
Srsf1Q6PDM2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.89■■□□□ 1.09
Srsf1Q6PDM2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Srsf1Q6PDM2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Srsf1Q6PDM2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.87■■□□□ 1.09
Srsf1Q6PDM2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Srsf1Q6PDM2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Srsf1Q6PDM2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Srsf1Q6PDM2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Srsf1Q6PDM2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Srsf1Q6PDM2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Srsf1Q6PDM2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Srsf1Q6PDM2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Srsf1Q6PDM2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Srsf1Q6PDM2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Srsf1Q6PDM2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Srsf1Q6PDM2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Srsf1Q6PDM2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Srsf1Q6PDM2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.79■■□□□ 1.08
Srsf1Q6PDM2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Srsf1Q6PDM2 Gm22567-201ENSMUST00000175542 342 ntBASIC21.78■■□□□ 1.08
Srsf1Q6PDM2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Srsf1Q6PDM2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.77■■□□□ 1.08
Srsf1Q6PDM2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Srsf1Q6PDM2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Srsf1Q6PDM2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Srsf1Q6PDM2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Srsf1Q6PDM2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Srsf1Q6PDM2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Srsf1Q6PDM2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Srsf1Q6PDM2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Srsf1Q6PDM2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Srsf1Q6PDM2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Srsf1Q6PDM2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.72■■□□□ 1.07
Srsf1Q6PDM2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srsf1Q6PDM2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Srsf1Q6PDM2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Srsf1Q6PDM2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Srsf1Q6PDM2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Srsf1Q6PDM2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Srsf1Q6PDM2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.68■■□□□ 1.06
Srsf1Q6PDM2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Srsf1Q6PDM2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Srsf1Q6PDM2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.67■■□□□ 1.06
Srsf1Q6PDM2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Srsf1Q6PDM2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Srsf1Q6PDM2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Srsf1Q6PDM2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Srsf1Q6PDM2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms