Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sptbn1Q62261 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptbn1Q62261 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptbn1Q62261 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptbn1Q62261 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptbn1Q62261 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptbn1Q62261 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptbn1Q62261 Nkain2-201ENSMUST00000092602 558 ntBASIC21.52■■□□□ 1.04
Sptbn1Q62261 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Sptbn1Q62261 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Sptbn1Q62261 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sptbn1Q62261 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Sptbn1Q62261 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptbn1Q62261 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sptbn1Q62261 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sptbn1Q62261 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sptbn1Q62261 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.47■■□□□ 1.03
Sptbn1Q62261 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptbn1Q62261 Gm15039-201ENSMUST00000118914 875 ntBASIC21.45■■□□□ 1.02
Sptbn1Q62261 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.44■■□□□ 1.02
Sptbn1Q62261 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sptbn1Q62261 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sptbn1Q62261 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sptbn1Q62261 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptbn1Q62261 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptbn1Q62261 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sptbn1Q62261 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.4■■□□□ 1.02
Sptbn1Q62261 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sptbn1Q62261 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sptbn1Q62261 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sptbn1Q62261 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptbn1Q62261 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Sptbn1Q62261 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptbn1Q62261 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptbn1Q62261 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.34■■□□□ 1.01
Sptbn1Q62261 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptbn1Q62261 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptbn1Q62261 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptbn1Q62261 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sptbn1Q62261 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sptbn1Q62261 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sptbn1Q62261 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sptbn1Q62261 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.29■■□□□ 1
Sptbn1Q62261 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptbn1Q62261 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptbn1Q62261 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Sptbn1Q62261 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptbn1Q62261 Gm6311-201ENSMUST00000073790 878 ntBASIC21.26■□□□□ 0.99
Sptbn1Q62261 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn1Q62261 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn1Q62261 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.26■□□□□ 0.99
Sptbn1Q62261 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn1Q62261 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn1Q62261 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn1Q62261 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sptbn1Q62261 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sptbn1Q62261 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptbn1Q62261 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.21■□□□□ 0.99
Sptbn1Q62261 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sptbn1Q62261 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sptbn1Q62261 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptbn1Q62261 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sptbn1Q62261 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sptbn1Q62261 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptbn1Q62261 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.17■□□□□ 0.98
Sptbn1Q62261 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn1Q62261 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sptbn1Q62261 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.16■□□□□ 0.98
Sptbn1Q62261 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn1Q62261 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn1Q62261 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptbn1Q62261 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sptbn1Q62261 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.14■□□□□ 0.97
Sptbn1Q62261 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sptbn1Q62261 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Sptbn1Q62261 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn1Q62261 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn1Q62261 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn1Q62261 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sptbn1Q62261 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms