Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sptbn1Q62261 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sptbn1Q62261 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sptbn1Q62261 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sptbn1Q62261 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sptbn1Q62261 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptbn1Q62261 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sptbn1Q62261 Nkain2-201ENSMUST00000092602 558 ntBASIC21.52■■□□□ 1.04
Sptbn1Q62261 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Sptbn1Q62261 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Sptbn1Q62261 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sptbn1Q62261 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Sptbn1Q62261 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sptbn1Q62261 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sptbn1Q62261 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sptbn1Q62261 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sptbn1Q62261 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.47■■□□□ 1.03
Sptbn1Q62261 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sptbn1Q62261 Gm15039-201ENSMUST00000118914 875 ntBASIC21.45■■□□□ 1.02
Sptbn1Q62261 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.44■■□□□ 1.02
Sptbn1Q62261 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sptbn1Q62261 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sptbn1Q62261 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sptbn1Q62261 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sptbn1Q62261 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sptbn1Q62261 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sptbn1Q62261 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.4■■□□□ 1.02
Sptbn1Q62261 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Sptbn1Q62261 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Sptbn1Q62261 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Sptbn1Q62261 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sptbn1Q62261 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Sptbn1Q62261 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptbn1Q62261 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptbn1Q62261 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.34■■□□□ 1.01
Sptbn1Q62261 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptbn1Q62261 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptbn1Q62261 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptbn1Q62261 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sptbn1Q62261 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sptbn1Q62261 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sptbn1Q62261 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sptbn1Q62261 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.29■■□□□ 1
Sptbn1Q62261 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptbn1Q62261 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptbn1Q62261 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Sptbn1Q62261 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptbn1Q62261 Gm6311-201ENSMUST00000073790 878 ntBASIC21.26■□□□□ 0.99
Sptbn1Q62261 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn1Q62261 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptbn1Q62261 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.26■□□□□ 0.99
Sptbn1Q62261 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptbn1Q62261 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn1Q62261 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn1Q62261 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptbn1Q62261 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sptbn1Q62261 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sptbn1Q62261 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.23■□□□□ 0.99
Sptbn1Q62261 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptbn1Q62261 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.21■□□□□ 0.99
Sptbn1Q62261 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sptbn1Q62261 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sptbn1Q62261 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sptbn1Q62261 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sptbn1Q62261 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sptbn1Q62261 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sptbn1Q62261 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sptbn1Q62261 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.17■□□□□ 0.98
Sptbn1Q62261 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn1Q62261 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sptbn1Q62261 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.16■□□□□ 0.98
Sptbn1Q62261 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn1Q62261 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sptbn1Q62261 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sptbn1Q62261 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sptbn1Q62261 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.14■□□□□ 0.97
Sptbn1Q62261 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sptbn1Q62261 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Sptbn1Q62261 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn1Q62261 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn1Q62261 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sptbn1Q62261 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sptbn1Q62261 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sptbn1Q62261 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms