Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lrrk2Q5S006 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Lrrk2Q5S006 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lrrk2Q5S006 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Lrrk2Q5S006 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lrrk2Q5S006 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Lrrk2Q5S006 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lrrk2Q5S006 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Lrrk2Q5S006 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lrrk2Q5S006 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Lrrk2Q5S006 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.61■■□□□ 1.21
Lrrk2Q5S006 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lrrk2Q5S006 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Lrrk2Q5S006 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.6■■□□□ 1.21
Lrrk2Q5S006 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Lrrk2Q5S006 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lrrk2Q5S006 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lrrk2Q5S006 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lrrk2Q5S006 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lrrk2Q5S006 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Lrrk2Q5S006 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lrrk2Q5S006 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lrrk2Q5S006 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
Lrrk2Q5S006 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.52■■□□□ 1.2
Lrrk2Q5S006 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Lrrk2Q5S006 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lrrk2Q5S006 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Lrrk2Q5S006 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.48■■□□□ 1.19
Lrrk2Q5S006 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Lrrk2Q5S006 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lrrk2Q5S006 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lrrk2Q5S006 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Lrrk2Q5S006 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lrrk2Q5S006 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
Lrrk2Q5S006 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.42■■□□□ 1.18
Lrrk2Q5S006 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrk2Q5S006 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Lrrk2Q5S006 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lrrk2Q5S006 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrk2Q5S006 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lrrk2Q5S006 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.4■■□□□ 1.18
Lrrk2Q5S006 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Lrrk2Q5S006 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lrrk2Q5S006 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrk2Q5S006 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lrrk2Q5S006 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.37■■□□□ 1.17
Lrrk2Q5S006 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrk2Q5S006 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrk2Q5S006 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrk2Q5S006 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lrrk2Q5S006 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrk2Q5S006 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.36■■□□□ 1.17
Lrrk2Q5S006 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lrrk2Q5S006 Gm6311-201ENSMUST00000073790 878 ntBASIC22.35■■□□□ 1.17
Lrrk2Q5S006 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrk2Q5S006 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lrrk2Q5S006 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Lrrk2Q5S006 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Lrrk2Q5S006 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Lrrk2Q5S006 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.33■■□□□ 1.16
Lrrk2Q5S006 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrk2Q5S006 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lrrk2Q5S006 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lrrk2Q5S006 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrk2Q5S006 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Lrrk2Q5S006 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.3■■□□□ 1.16
Lrrk2Q5S006 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lrrk2Q5S006 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.29■■□□□ 1.16
Lrrk2Q5S006 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrk2Q5S006 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lrrk2Q5S006 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Lrrk2Q5S006 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.26■■□□□ 1.15
Lrrk2Q5S006 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lrrk2Q5S006 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrk2Q5S006 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrk2Q5S006 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrk2Q5S006 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lrrk2Q5S006 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrk2Q5S006 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrk2Q5S006 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lrrk2Q5S006 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.23■■□□□ 1.15
Lrrk2Q5S006 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrk2Q5S006 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrk2Q5S006 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lrrk2Q5S006 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms