Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Defb28Q3V2L0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
Defb28Q3V2L0 Gm11599-201ENSMUST00000118720 878 ntBASIC24.7■■□□□ 1.54
Defb28Q3V2L0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.7■■□□□ 1.54
Defb28Q3V2L0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.69■■□□□ 1.54
Defb28Q3V2L0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Defb28Q3V2L0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Defb28Q3V2L0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Defb28Q3V2L0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Defb28Q3V2L0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Defb28Q3V2L0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Defb28Q3V2L0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.65■■□□□ 1.54
Defb28Q3V2L0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Defb28Q3V2L0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Defb28Q3V2L0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.64■■□□□ 1.54
Defb28Q3V2L0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Defb28Q3V2L0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.62■■□□□ 1.53
Defb28Q3V2L0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Defb28Q3V2L0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Defb28Q3V2L0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Defb28Q3V2L0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Defb28Q3V2L0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.61■■□□□ 1.53
Defb28Q3V2L0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Defb28Q3V2L0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.6■■□□□ 1.53
Defb28Q3V2L0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Defb28Q3V2L0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Defb28Q3V2L0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Defb28Q3V2L0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Defb28Q3V2L0 Mir6538-201ENSMUST00000183713 110 ntBASIC24.59■■□□□ 1.53
Defb28Q3V2L0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Defb28Q3V2L0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Defb28Q3V2L0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Defb28Q3V2L0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Defb28Q3V2L0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Defb28Q3V2L0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Defb28Q3V2L0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Defb28Q3V2L0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Defb28Q3V2L0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Defb28Q3V2L0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Defb28Q3V2L0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Defb28Q3V2L0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Defb28Q3V2L0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Defb28Q3V2L0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Defb28Q3V2L0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Defb28Q3V2L0 Gm11175-201ENSMUST00000116172 543 ntBASIC24.49■■□□□ 1.51
Defb28Q3V2L0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.48■■□□□ 1.51
Defb28Q3V2L0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Defb28Q3V2L0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Defb28Q3V2L0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Defb28Q3V2L0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Defb28Q3V2L0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Defb28Q3V2L0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Defb28Q3V2L0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Defb28Q3V2L0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
Defb28Q3V2L0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Defb28Q3V2L0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Defb28Q3V2L0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Defb28Q3V2L0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.45■■□□□ 1.5
Defb28Q3V2L0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Defb28Q3V2L0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Defb28Q3V2L0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.43■■□□□ 1.5
Defb28Q3V2L0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.43■■□□□ 1.5
Defb28Q3V2L0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Defb28Q3V2L0 Cap2-205ENSMUST00000225824 1634 ntBASIC24.43■■□□□ 1.5
Defb28Q3V2L0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Defb28Q3V2L0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Defb28Q3V2L0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.4■■□□□ 1.5
Defb28Q3V2L0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Defb28Q3V2L0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Defb28Q3V2L0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.38■■□□□ 1.49
Defb28Q3V2L0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Defb28Q3V2L0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Defb28Q3V2L0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.34■■□□□ 1.49
Defb28Q3V2L0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Defb28Q3V2L0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.32■■□□□ 1.48
Defb28Q3V2L0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.31■■□□□ 1.48
Defb28Q3V2L0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Defb28Q3V2L0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.3■■□□□ 1.48
Defb28Q3V2L0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Defb28Q3V2L0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Defb28Q3V2L0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Defb28Q3V2L0 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.28■■□□□ 1.48
Defb28Q3V2L0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Defb28Q3V2L0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Defb28Q3V2L0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Defb28Q3V2L0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.28■■□□□ 1.48
Defb28Q3V2L0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Defb28Q3V2L0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.28■■□□□ 1.48
Defb28Q3V2L0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.27■■□□□ 1.48
Defb28Q3V2L0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Defb28Q3V2L0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Defb28Q3V2L0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Defb28Q3V2L0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Defb28Q3V2L0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Defb28Q3V2L0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Defb28Q3V2L0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Defb28Q3V2L0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Defb28Q3V2L0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.22■■□□□ 1.47
Defb28Q3V2L0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Defb28Q3V2L0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms