Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc1aQ3UWR2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc1aQ3UWR2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc1aQ3UWR2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc1aQ3UWR2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1aQ3UWR2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1aQ3UWR2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1aQ3UWR2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.4■□□□□ 0.54
Khdc1aQ3UWR2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1aQ3UWR2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc1aQ3UWR2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1aQ3UWR2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1aQ3UWR2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1aQ3UWR2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Khdc1aQ3UWR2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Khdc1aQ3UWR2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.38■□□□□ 0.53
Khdc1aQ3UWR2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Khdc1aQ3UWR2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.37■□□□□ 0.53
Khdc1aQ3UWR2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.36■□□□□ 0.53
Khdc1aQ3UWR2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Khdc1aQ3UWR2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1aQ3UWR2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1aQ3UWR2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.35■□□□□ 0.53
Khdc1aQ3UWR2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Khdc1aQ3UWR2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Khdc1aQ3UWR2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1aQ3UWR2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Khdc1aQ3UWR2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1aQ3UWR2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1aQ3UWR2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Khdc1aQ3UWR2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Khdc1aQ3UWR2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.33■□□□□ 0.52
Khdc1aQ3UWR2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Khdc1aQ3UWR2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Khdc1aQ3UWR2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Khdc1aQ3UWR2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Khdc1aQ3UWR2 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.31■□□□□ 0.52
Khdc1aQ3UWR2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Khdc1aQ3UWR2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1aQ3UWR2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Khdc1aQ3UWR2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.29■□□□□ 0.52
Khdc1aQ3UWR2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1aQ3UWR2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1aQ3UWR2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1aQ3UWR2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Khdc1aQ3UWR2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1aQ3UWR2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1aQ3UWR2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1aQ3UWR2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Khdc1aQ3UWR2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc1aQ3UWR2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Khdc1aQ3UWR2 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.26■□□□□ 0.51
Khdc1aQ3UWR2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Khdc1aQ3UWR2 Gm25262-201ENSMUST00000174934 133 ntBASIC18.26■□□□□ 0.51
Khdc1aQ3UWR2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1aQ3UWR2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1aQ3UWR2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1aQ3UWR2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1aQ3UWR2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Khdc1aQ3UWR2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Khdc1aQ3UWR2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Khdc1aQ3UWR2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Khdc1aQ3UWR2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc1aQ3UWR2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc1aQ3UWR2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Khdc1aQ3UWR2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Khdc1aQ3UWR2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc1aQ3UWR2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.2■□□□□ 0.5
Khdc1aQ3UWR2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Khdc1aQ3UWR2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Khdc1aQ3UWR2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1aQ3UWR2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Khdc1aQ3UWR2 Gm27322-201ENSMUST00000184007 104 ntBASIC18.17■□□□□ 0.5
Khdc1aQ3UWR2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.16■□□□□ 0.5
Khdc1aQ3UWR2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc1aQ3UWR2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc1aQ3UWR2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Khdc1aQ3UWR2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Khdc1aQ3UWR2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Khdc1aQ3UWR2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc1aQ3UWR2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc1aQ3UWR2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Khdc1aQ3UWR2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Khdc1aQ3UWR2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc1aQ3UWR2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc1aQ3UWR2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc1aQ3UWR2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc1aQ3UWR2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Khdc1aQ3UWR2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Khdc1aQ3UWR2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Khdc1aQ3UWR2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc1aQ3UWR2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Khdc1aQ3UWR2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms